RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-223	ENST00000485796	GAS2L3	Q86XJ1	694 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	TRIM59	Q8IWR1	403 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	BEST2	Q8NFU1	509 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	IGSF21	Q96ID5	467 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	B3GALT6	Q96L58	329 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	ZNF576	Q9H609	170 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	METTL14	Q9HCE5	456 aa	Known RBP	13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	ALG13	Q9NP73	1137 aa	Known RBP	13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	SLC38A7	Q9NVC3	462 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	AGAP1	Q9UPQ3	857 aa		13.71	□□□□□ -0.21
HDAC7-223	ENST00000485796	KCNJ18	B7U540	433 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	GRM6	O15303	877 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	FGF18	O76093	207 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	EFEMP2	O95967	443 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	TMEM191B	P0C7N4	346 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	ATP1A3	P13637	1013 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	ZNF18	P17022	549 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	ALDH7A1	P49419	539 aa	Known RBP	13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	MARS	P56192	900 aa	Known RBP	13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	KCNJ12	Q14500	433 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	GRIN2C	Q14957	1233 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	DCLRE1A	Q6PJP8	1040 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796		Q7L0L9	218 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	USP37	Q86T82	979 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	SPPL3	Q8TCT6	385 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	GDPD5	Q8WTR4	605 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	CACTIN	Q8WUQ7	758 aa	Known RBP	13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	SEMA4D	Q92854	862 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	ANKRD36BP1	Q96IX9	119 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	FAM161B	Q96MY7	647 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	GPR62	Q9BZJ7	368 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	SPG21	Q9NZD8	308 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	PCDHGC5	Q9Y5F6	944 aa		13.7	□□□□□ -0.22
HDAC7-223	ENST00000485796	SCN1A	P35498	2009 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	LPXN	O60711	386 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	B3GAT3	O94766	335 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	TNNC2	P02585	160 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	KRT19	P08727	400 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	RPL9	P32969	192 aa	Known RBP	13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	MYL6	P60660	151 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	BIRC3	Q13489	604 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	CAMK1	Q14012	370 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	ZACN	Q401N2	412 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	TIGD5	Q53EQ6	642 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	TCP11X2	Q5H9J9	407 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	NT5DC4	Q86YG4	428 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	FBXO22	Q8NEZ5	403 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	TAS1R2	Q8TE23	839 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	RSPH1	Q8WYR4	309 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	UROC1	Q96N76	676 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	TSPAN18	Q96SJ8	248 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	PI4K2A	Q9BTU6	479 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	COLEC11	Q9BWP8	271 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	RBSN	Q9H1K0	784 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	TAB2	Q9NYJ8	693 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	PCDHB12	Q9Y5F1	795 aa		13.69	□□□□□ -0.22
HDAC7-223	ENST00000485796	C5orf67	F2Z3F1	127 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	XPOT	O43592	962 aa	Known RBP	13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	TADA2A	O75478	443 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	HLA-DRA	P01903	254 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	PRKCSH	P14314	528 aa	Predicted RBP	13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	EEF1G	P26641	437 aa	Known RBP	13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	LILRA4	P59901	499 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	ERVFC1	P60507	584 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	RBP5	P82980	135 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	KCNH2	Q12809	1159 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	GPM6B	Q13491	265 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	KRT31	Q15323	416 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	MIIP	Q5JXC2	388 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	SPOPL	Q6IQ16	392 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	FUT10	Q6P4F1	479 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	APTX	Q7Z2E3	356 aa	Known RBP	13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	ANKRD20A12P	Q8NF67	263 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	AUTS2	Q8WXX7	1259 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	DDX27	Q96GQ7	796 aa	Known RBP	13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	TUBGCP2	Q9BSJ2	902 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	XYLT2	Q9H1B5	865 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	PRDM12	Q9H4Q4	367 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	APOBEC3G	Q9HC16	384 aa	Known RBP	13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	AAAS	Q9NRG9	546 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	ADAM28	Q9UKQ2	775 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	ITGA11	Q9UKX5	1188 aa		13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.68	□□□□□ -0.22
HDAC7-223	ENST00000485796		H3BNC9	293 aa		13.67	□□□□□ -0.22
HDAC7-223	ENST00000485796	TMEM189-UBE2V1	I3L0A0	370 aa		13.67	□□□□□ -0.22
HDAC7-223	ENST00000485796	PES1	O00541	588 aa	Known RBP	13.67	□□□□□ -0.22
HDAC7-223	ENST00000485796	STX10	O60499	249 aa		13.67	□□□□□ -0.22
HDAC7-223	ENST00000485796	PHACTR2	O75167	634 aa		13.67	□□□□□ -0.22
HDAC7-223	ENST00000485796	RB1	P06400	928 aa		13.67	□□□□□ -0.22
HDAC7-223	ENST00000485796	GTF2H1	P32780	548 aa		13.67	□□□□□ -0.22
HDAC7-223	ENST00000485796	IRS1	P35568	1242 aa		13.67	□□□□□ -0.22
HDAC7-223	ENST00000485796	FMO5	P49326	533 aa		13.67	□□□□□ -0.22
HDAC7-223	ENST00000485796	AARS	P49588	968 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
HDAC7-223	ENST00000485796	MXI1	P50539	228 aa		13.67	□□□□□ -0.22
HDAC7-223	ENST00000485796	FXR1	P51114	621 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
HDAC7-223	ENST00000485796	PLCB3	Q01970	1234 aa		13.67	□□□□□ -0.22
HDAC7-223	ENST00000485796	APBA1	Q02410	837 aa		13.67	□□□□□ -0.22
HDAC7-223	ENST00000485796	ENPEP	Q07075	957 aa		13.67	□□□□□ -0.22
HDAC7-223	ENST00000485796	NCOA4	Q13772	614 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms