RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 NR3C1P04150 777 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 LDHCP07864 332 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 GOLGA8HP0CJ92 632 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 ACTN1P12814 892 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 XRCC5P13010 732 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 HOXD8P13378 290 aaPredicted RBP5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 RARGP13631 454 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 SLC9A1P19634 815 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 RPL13P26373 211 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 ATP5DP30049 168 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 HOXD13P35453 343 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 SOX5P35711 763 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 CDK8P49336 464 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 GALCP54803 685 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 EVA1CP58658 441 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 RNASE9P60153 205 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 ARID5AQ03989 594 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 ITPK1Q13572 414 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 ACVR2BQ13705 512 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 AUHQ13825 339 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 BLMHQ13867 455 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 ADGRE1Q14246 886 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 KIF22Q14807 665 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 NAA25Q14CX7 972 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 ARSHQ5FYA8 562 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 SPDYAQ5MJ70 313 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 RNF43Q68DV7 783 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 PHLDB3Q6NSJ2 640 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 TXNDC11Q6PKC3 985 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 TRMT10CQ7L0Y3 403 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 DAAM2Q86T65 1068 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 TXNRD3Q86VQ6 643 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 RHOT2Q8IXI1 618 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 PRELID2Q8N945 189 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 SLC44A5Q8NCS7 719 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 SH3TC2Q8TF17 1288 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 CTNNBL1Q8WYA6 563 aaPredicted RBP5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 CELF1Q92879 486 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 ART4Q93070 314 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 LENG1Q96BZ8 264 aaPredicted RBP5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 BORCS6Q96GS4 357 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 SERPINB12Q96P63 405 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 RPS6KC1Q96S38 1066 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 SELENOSQ9BQE4 189 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 STK33Q9BYT3 514 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 LRMDAQ9H2I8 198 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 DHX36Q9H2U1 1008 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 ECT2Q9H8V3 914 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 RXFP1Q9HBX9 757 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 USP40Q9NVE5 1235 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 GCNT4Q9P109 453 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 PRKAG3Q9UGI9 489 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 BAIAP2L1Q9UHR4 511 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 LGALS13Q9UHV8 139 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 PPP1R9AQ9ULJ8 1098 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 POLIQ9UNA4 740 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 RPL26L1Q9UNX3 145 aaKnown RBP5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 ARL2BPQ9Y2Y0 163 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 NR2E1Q9Y466 385 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 QSER1Q2KHR3 1735 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 ZMYM2Q9UBW7 1377 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 CDK5RAP2Q96SN8 1893 aa5.03□□□□□ -1.6
SMARCC1-206ENST00000485737 ARFGEF1Q9Y6D6 1849 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 GAKO14976 1311 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 ADGRA3Q8IWK6 1321 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 PASKQ96RG2 1323 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 GPR75-ASB3A0A0A6YYF3 556 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 ANKRD62A6NC57 917 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 WTIPA6NIX2 430 aaPredicted RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 E9PMD0 336 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 IGF2BP3O00425 579 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 TBX3O15119 743 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 EIF3DO15371 548 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 DEAF1O75398 565 aaPredicted RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 AKAP3O75969 853 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 NEBLO76041 1014 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 FAM13AO94988 1023 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 TTLL1O95922 423 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 LDHBP07195 334 aaKnown RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 GAP43P17677 238 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 CES1P23141 567 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 MZF1P28698 734 aaPredicted RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 RXRBP28702 533 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 PDE6BP35913 854 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 RPL21P46778 160 aaKnown RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 TNNI2P48788 182 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 CASP5P51878 434 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 RPS8P62241 208 aaKnown RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 KCNJ2P63252 427 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 IFI35P80217 286 aaPredicted RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 LACTBP83111 547 aaPredicted RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 SPIRE1Q08AE8 756 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 ZNF543Q08ER8 600 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 GIT2Q14161 759 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 RRP1BQ14684 758 aaKnown RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 PPP2R5AQ15172 486 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 PARP6Q2NL67 630 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 CCDC38Q502W7 563 aa5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 HERC4Q5GLZ8 1057 aaPredicted RBP5.02□□□□□ -1.61
SMARCC1-206ENST00000485737 RHBDF2Q6PJF5 856 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms