RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 POLR2BP30876 1174 aaKnown RBP17.06■□□□□ 0.32
APOE-205ENST00000485628 ATICP31939 592 aa17.06■□□□□ 0.32
APOE-205ENST00000485628 CLCNKBP51801 687 aa17.06■□□□□ 0.32
APOE-205ENST00000485628 MYL6P60660 151 aa17.06■□□□□ 0.32
APOE-205ENST00000485628 MLLT1Q03111 559 aaPredicted RBP17.06■□□□□ 0.32
APOE-205ENST00000485628 UBXN1Q04323 297 aa17.06■□□□□ 0.32
APOE-205ENST00000485628 NCOA4Q13772 614 aa17.06■□□□□ 0.32
APOE-205ENST00000485628 EXOC3L4Q17RC7 722 aa17.06■□□□□ 0.32
APOE-205ENST00000485628 FILIP1LQ4L180 1135 aa17.06■□□□□ 0.32
APOE-205ENST00000485628 FAM109BQ6ICB4 259 aaPredicted RBP17.06■□□□□ 0.32
APOE-205ENST00000485628 TRIM65Q6PJ69 517 aa17.06■□□□□ 0.32
APOE-205ENST00000485628 GBP6Q6ZN66 633 aa17.06■□□□□ 0.32
APOE-205ENST00000485628 TAF4BQ92750 862 aa17.06■□□□□ 0.32
APOE-205ENST00000485628 MRFAP1L1Q96HT8 127 aa17.06■□□□□ 0.32
APOE-205ENST00000485628 RNPC3Q96LT9 517 aaKnown RBP17.06■□□□□ 0.32
APOE-205ENST00000485628 APOBEC3GQ9HC16 384 aaKnown RBP17.06■□□□□ 0.32
APOE-205ENST00000485628 PLCB1Q9NQ66 1216 aa17.06■□□□□ 0.32
APOE-205ENST00000485628 CACNG4Q9UBN1 327 aa17.06■□□□□ 0.32
APOE-205ENST00000485628 LAMA3Q16787 3333 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 SPTLC1O15269 473 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 TPM2P07951 284 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 IBSPP21815 317 aaPredicted RBP17.05■□□□□ 0.32
APOE-205ENST00000485628 PAX3P23760 479 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 MRE11P49959 708 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 LILRA4P59901 499 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 SGSM1Q2NKQ1 1148 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 SMYD5Q6GMV2 418 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 FAM117BQ6P1L5 589 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 DCLRE1AQ6PJP8 1040 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 CRACR2AQ9BSW2 395 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 NAA15Q9BXJ9 866 aaKnown RBP17.05■□□□□ 0.32
APOE-205ENST00000485628 TTYH3Q9C0H2 523 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 MMRN2Q9H8L6 949 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 MARCH5Q9NX47 278 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 GDAP2Q9NXN4 497 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 FBXL5Q9UKA1 691 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 AGAP1Q9UPQ3 857 aa17.05■□□□□ 0.32
APOE-205ENST00000485628 MRPL42Q9Y6G3 142 aaKnown RBP17.05■□□□□ 0.32
APOE-205ENST00000485628 ITIH6Q6UXX5 1313 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 CASTOR2A6NHX0 329 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 PODXLO00592 558 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 NRP1O14786 923 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 CBFA2T2O43439 604 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 PNPLA4P41247 253 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 SLC11A1P49279 550 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 ZNF75DP51815 510 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 BIRC3Q13489 604 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 SYCP1Q15431 976 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 FIGNQ5HY92 759 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 FKBP15Q5T1M5 1219 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 PHLDB3Q6NSJ2 640 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 RNF168Q8IYW5 571 aaPredicted RBP17.04■□□□□ 0.32
APOE-205ENST00000485628 TATDN2Q93075 761 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 YME1L1Q96TA2 773 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 BCO2Q9BYV7 579 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 INTS2Q9H0H0 1204 aaKnown RBP17.04■□□□□ 0.32
APOE-205ENST00000485628 GANQ9H2C0 597 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 GCNT4Q9P109 453 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 NUB1Q9Y5A7 615 aa17.04■□□□□ 0.32
APOE-205ENST00000485628 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.03■□□□□ 0.32
APOE-205ENST00000485628 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.03■□□□□ 0.32
APOE-205ENST00000485628 LCHNA4D1U4 455 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 CARNS1A5YM72 827 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 GRXCR1A8MXD5 290 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 F8W810 466 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 M0QZQ0 153 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 EPHB6O15197 1021 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 ALDH2P05091 517 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 ITGB1P05556 798 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 FAM163BP0C2L3 166 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 KLK7P49862 253 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 BCAR1P56945 870 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 RNASELQ05823 741 aaKnown RBP17.03■□□□□ 0.32
APOE-205ENST00000485628 CETN1Q12798 172 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 BTG3Q14201 252 aaPredicted RBP17.03■□□□□ 0.32
APOE-205ENST00000485628 PAN2Q504Q3 1202 aaKnown RBP17.03■□□□□ 0.32
APOE-205ENST00000485628 KLHDC7AQ5VTJ3 777 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 VSTM4Q8IW00 320 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 TDHQ8IZJ6 230 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 UBR7Q8N806 425 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 HPDLQ96IR7 371 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 PI4K2AQ9BTU6 479 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 PCDHA11Q9Y5I1 949 aa17.03■□□□□ 0.32
APOE-205ENST00000485628 CHD9Q3L8U1 2897 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 TLL1O43897 1013 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 PHACTR2O75167 634 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 CAPN15O75808 1086 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 ARHGEF15O94989 841 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 KIF4AO95239 1232 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 PIK3CAP42336 1068 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 TAF6P49848 677 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 RABGGTBP53611 331 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 APBA1Q02410 837 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 TBX2Q13207 712 aaPredicted RBP17.02■□□□□ 0.32
APOE-205ENST00000485628 TRPC3Q13507 836 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 PTPN21Q16825 1174 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 TIGD5Q53EQ6 642 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 SPOPLQ6IQ16 392 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 KCNT2Q6UVM3 1135 aa17.02■□□□□ 0.32
APOE-205ENST00000485628 TMEM173Q86WV6 379 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms