RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 GRM6O15303 877 aa21.5■■□□□ 1.03
COL6A2-208ENST00000485591 TADA2AO75478 443 aa21.5■■□□□ 1.03
COL6A2-208ENST00000485591 MYL5Q02045 173 aa21.5■■□□□ 1.03
COL6A2-208ENST00000485591 FUT10Q6P4F1 479 aa21.5■■□□□ 1.03
COL6A2-208ENST00000485591 HASPINQ8TF76 798 aa21.5■■□□□ 1.03
COL6A2-208ENST00000485591 VN1R3Q9BXE9 311 aa21.5■■□□□ 1.03
COL6A2-208ENST00000485591 PRDM12Q9H4Q4 367 aa21.5■■□□□ 1.03
COL6A2-208ENST00000485591 PUF60Q9UHX1 559 aaKnown RBP21.5■■□□□ 1.03
COL6A2-208ENST00000485591 SIX4Q9UIU6 781 aa21.5■■□□□ 1.03
COL6A2-208ENST00000485591 SF3B1O75533 1304 aaKnown RBP eCLIP21.5■■□□□ 1.03
COL6A2-208ENST00000485591 STX10O60499 249 aa21.49■■□□□ 1.03
COL6A2-208ENST00000485591 LPXNO60711 386 aa21.49■■□□□ 1.03
COL6A2-208ENST00000485591 C4BPAP04003 597 aaKnown RBP21.49■■□□□ 1.03
COL6A2-208ENST00000485591 PAX3P23760 479 aa21.49■■□□□ 1.03
COL6A2-208ENST00000485591 IGFBP6P24592 240 aaPredicted RBP21.49■■□□□ 1.03
COL6A2-208ENST00000485591 POLR2BP30876 1174 aaKnown RBP21.49■■□□□ 1.03
COL6A2-208ENST00000485591 GTF2H1P32780 548 aa21.49■■□□□ 1.03
COL6A2-208ENST00000485591 ELAVL2Q12926 359 aaKnown RBP21.49■■□□□ 1.03
COL6A2-208ENST00000485591 DCAF17Q5H9S7 520 aaPredicted RBP21.49■■□□□ 1.03
COL6A2-208ENST00000485591 TDRD10Q5VZ19 366 aaKnown RBP21.49■■□□□ 1.03
COL6A2-208ENST00000485591 C15orf39Q6ZRI6 1047 aa21.49■■□□□ 1.03
COL6A2-208ENST00000485591 IRF2BP1Q8IU81 584 aa21.49■■□□□ 1.03
COL6A2-208ENST00000485591 FAM114A1Q8IWE2 563 aa21.49■■□□□ 1.03
COL6A2-208ENST00000485591 TRIM59Q8IWR1 403 aa21.49■■□□□ 1.03
COL6A2-208ENST00000485591 LRRC52Q8N7C0 313 aa21.49■■□□□ 1.03
COL6A2-208ENST00000485591 POF1BQ8WVV4 589 aa21.49■■□□□ 1.03
COL6A2-208ENST00000485591 SLC35C1Q96A29 364 aa21.49■■□□□ 1.03
COL6A2-208ENST00000485591 CNOT6LQ96LI5 555 aaKnown RBP21.49■■□□□ 1.03
COL6A2-208ENST00000485591 ZNF560Q96MR9 790 aa21.49■■□□□ 1.03
COL6A2-208ENST00000485591 NFE2L3Q9Y4A8 694 aa21.49■■□□□ 1.03
COL6A2-208ENST00000485591 NUB1Q9Y5A7 615 aa21.49■■□□□ 1.03
COL6A2-208ENST00000485591 RFXAPO00287 272 aa21.48■■□□□ 1.03
COL6A2-208ENST00000485591 KRT19P08727 400 aa21.48■■□□□ 1.03
COL6A2-208ENST00000485591 DNAJB1P25685 340 aa21.48■■□□□ 1.03
COL6A2-208ENST00000485591 PNPLA4P41247 253 aa21.48■■□□□ 1.03
COL6A2-208ENST00000485591 AARSP49588 968 aaKnown RBP eCLIP21.48■■□□□ 1.03
COL6A2-208ENST00000485591 RBP5P82980 135 aa21.48■■□□□ 1.03
COL6A2-208ENST00000485591 PPP3CAQ08209 521 aa21.48■■□□□ 1.03
COL6A2-208ENST00000485591 ZACNQ401N2 412 aa21.48■■□□□ 1.03
COL6A2-208ENST00000485591 TCERG1LQ5VWI1 586 aa21.48■■□□□ 1.03
COL6A2-208ENST00000485591 Q7L0L9 218 aa21.48■■□□□ 1.03
COL6A2-208ENST00000485591 FAM161BQ96MY7 647 aa21.48■■□□□ 1.03
COL6A2-208ENST00000485591 HERC2P3Q9BVR0 1158 aa21.48■■□□□ 1.03
COL6A2-208ENST00000485591 GPR62Q9BZJ7 368 aa21.48■■□□□ 1.03
COL6A2-208ENST00000485591 TMEM8AQ9HCN3 771 aa21.48■■□□□ 1.03
COL6A2-208ENST00000485591 AGAP1Q9UPQ3 857 aa21.48■■□□□ 1.03
COL6A2-208ENST00000485591 TRAPPC3O43617 180 aa21.47■■□□□ 1.03
COL6A2-208ENST00000485591 SOD2P04179 222 aa21.47■■□□□ 1.03
COL6A2-208ENST00000485591 BRCC3P46736 316 aa21.47■■□□□ 1.03
COL6A2-208ENST00000485591 GCLMP48507 274 aa21.47■■□□□ 1.03
COL6A2-208ENST00000485591 TAF6P49848 677 aa21.47■■□□□ 1.03
COL6A2-208ENST00000485591 ZNF165P49910 485 aa21.47■■□□□ 1.03
COL6A2-208ENST00000485591 LILRA4P59901 499 aa21.47■■□□□ 1.03
COL6A2-208ENST00000485591 BIRC3Q13489 604 aa21.47■■□□□ 1.03
COL6A2-208ENST00000485591 CAMK1Q14012 370 aa21.47■■□□□ 1.03
COL6A2-208ENST00000485591 SV2CQ496J9 727 aa21.47■■□□□ 1.03
COL6A2-208ENST00000485591 SV2AQ7L0J3 742 aa21.47■■□□□ 1.03
COL6A2-208ENST00000485591 ZBP1Q9H171 429 aa21.47■■□□□ 1.03
COL6A2-208ENST00000485591 TLR9Q9NR96 1032 aa21.47■■□□□ 1.03
COL6A2-208ENST00000485591 R3HCC1Q9Y3T6 440 aaKnown RBP21.47■■□□□ 1.03
COL6A2-208ENST00000485591 MYO9BQ13459 2157 aa21.47■■□□□ 1.03
COL6A2-208ENST00000485591 CHD7Q9P2D1 2997 aa21.46■■□□□ 1.03
COL6A2-208ENST00000485591 PHACTR2O75167 634 aa21.46■■□□□ 1.03
COL6A2-208ENST00000485591 CAVIN2O95810 425 aa21.46■■□□□ 1.03
COL6A2-208ENST00000485591 NCAPHQ15003 741 aa21.46■■□□□ 1.03
COL6A2-208ENST00000485591 PTPROQ16827 1216 aa21.46■■□□□ 1.03
COL6A2-208ENST00000485591 TIGD5Q53EQ6 642 aa21.46■■□□□ 1.03
COL6A2-208ENST00000485591 CDKAL1Q5VV42 579 aa21.46■■□□□ 1.03
COL6A2-208ENST00000485591 KRT39Q6A163 491 aa21.46■■□□□ 1.03
COL6A2-208ENST00000485591 SCARA3Q6AZY7 606 aa21.46■■□□□ 1.03
COL6A2-208ENST00000485591 VPS52Q8N1B4 723 aa21.46■■□□□ 1.03
COL6A2-208ENST00000485591 DEFB123Q8N688 67 aa21.46■■□□□ 1.03
COL6A2-208ENST00000485591 AOPEPQ8N6M6 819 aa21.46■■□□□ 1.03
COL6A2-208ENST00000485591 MRPL38Q96DV4 380 aaKnown RBP21.46■■□□□ 1.03
COL6A2-208ENST00000485591 SUSD3Q96L08 255 aa21.46■■□□□ 1.03
COL6A2-208ENST00000485591 SAMSN1Q9NSI8 373 aaKnown RBP21.46■■□□□ 1.03
COL6A2-208ENST00000485591 MAGEC2Q9UBF1 373 aaPredicted RBP21.46■■□□□ 1.03
COL6A2-208ENST00000485591 M0QZQ0 153 aa21.45■■□□□ 1.02
COL6A2-208ENST00000485591 FSCN2O14926 492 aa21.45■■□□□ 1.02
COL6A2-208ENST00000485591 SPTLC1O15269 473 aa21.45■■□□□ 1.02
COL6A2-208ENST00000485591 VNN1O95497 513 aa21.45■■□□□ 1.02
COL6A2-208ENST00000485591 CTSAP10619 480 aa21.45■■□□□ 1.02
COL6A2-208ENST00000485591 MXI1P50539 228 aa21.45■■□□□ 1.02
COL6A2-208ENST00000485591 MYO1EQ12965 1108 aa21.45■■□□□ 1.02
COL6A2-208ENST00000485591 TRPC3Q13507 836 aa21.45■■□□□ 1.02
COL6A2-208ENST00000485591 USP41Q3LFD5 358 aa21.45■■□□□ 1.02
COL6A2-208ENST00000485591 FAM171A1Q5VUB5 890 aa21.45■■□□□ 1.02
COL6A2-208ENST00000485591 PDE12Q6L8Q7 609 aaKnown RBP21.45■■□□□ 1.02
COL6A2-208ENST00000485591 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.45■■□□□ 1.02
COL6A2-208ENST00000485591 TCF25Q9BQ70 676 aa21.45■■□□□ 1.02
COL6A2-208ENST00000485591 MMRN2Q9H8L6 949 aa21.45■■□□□ 1.02
COL6A2-208ENST00000485591 CHST7Q9NS84 486 aa21.45■■□□□ 1.02
COL6A2-208ENST00000485591 LMCD1Q9NZU5 365 aa21.45■■□□□ 1.02
COL6A2-208ENST00000485591 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.45■■□□□ 1.02
COL6A2-208ENST00000485591 KPNA7A9QM74 516 aa21.44■■□□□ 1.02
COL6A2-208ENST00000485591 KCNJ18B7U540 433 aa21.44■■□□□ 1.02
COL6A2-208ENST00000485591 I3L4J1 428 aa21.44■■□□□ 1.02
COL6A2-208ENST00000485591 SYN3O14994 580 aa21.44■■□□□ 1.02
COL6A2-208ENST00000485591 STAU1O95793 577 aaKnown RBP21.44■■□□□ 1.02
COL6A2-208ENST00000485591 CST3P01034 146 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms