RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 INTS13Q9NVM9 706 aa12.84□□□□□ -0.35
APTX-227ENST00000485479 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.83□□□□□ -0.35
APTX-227ENST00000485479 CETN3O15182 167 aa12.83□□□□□ -0.35
APTX-227ENST00000485479 RPL13P26373 211 aaKnown RBP12.83□□□□□ -0.35
APTX-227ENST00000485479 PSMC2P35998 433 aaKnown RBP12.83□□□□□ -0.35
APTX-227ENST00000485479 GCLMP48507 274 aa12.83□□□□□ -0.35
APTX-227ENST00000485479 FKBP3Q00688 224 aaKnown RBP12.83□□□□□ -0.35
APTX-227ENST00000485479 LRRC63Q05C16 580 aa12.83□□□□□ -0.35
APTX-227ENST00000485479 TCERG1LQ5VWI1 586 aa12.83□□□□□ -0.35
APTX-227ENST00000485479 TDRD10Q5VZ19 366 aaKnown RBP12.83□□□□□ -0.35
APTX-227ENST00000485479 SASS6Q6UVJ0 657 aa12.83□□□□□ -0.35
APTX-227ENST00000485479 MRPL38Q96DV4 380 aaKnown RBP12.83□□□□□ -0.35
APTX-227ENST00000485479 CGRRF1Q99675 332 aa12.83□□□□□ -0.35
APTX-227ENST00000485479 ZBP1Q9H171 429 aa12.83□□□□□ -0.35
APTX-227ENST00000485479 KIAA1586Q9HCI6 787 aa12.83□□□□□ -0.35
APTX-227ENST00000485479 AGAP1Q9UPQ3 857 aa12.83□□□□□ -0.35
APTX-227ENST00000485479 SF3B1O75533 1304 aaKnown RBP eCLIP12.83□□□□□ -0.36
APTX-227ENST00000485479 CST3P01034 146 aaPredicted RBP12.83□□□□□ -0.36
APTX-227ENST00000485479 LRPAP1P30533 357 aa12.83□□□□□ -0.36
APTX-227ENST00000485479 VAMP7P51809 220 aa12.83□□□□□ -0.36
APTX-227ENST00000485479 TYRO3Q06418 890 aa12.83□□□□□ -0.36
APTX-227ENST00000485479 PPP3CAQ08209 521 aa12.83□□□□□ -0.36
APTX-227ENST00000485479 BFSP1Q12934 665 aa12.83□□□□□ -0.36
APTX-227ENST00000485479 BIRC3Q13489 604 aa12.83□□□□□ -0.36
APTX-227ENST00000485479 TCEAL5Q5H9L2 206 aa12.83□□□□□ -0.36
APTX-227ENST00000485479 EP400NLQ6ZTU2 488 aa12.83□□□□□ -0.36
APTX-227ENST00000485479 DDX53Q86TM3 631 aaKnown RBP12.83□□□□□ -0.36
APTX-227ENST00000485479 WDR49Q8IV35 697 aa12.83□□□□□ -0.36
APTX-227ENST00000485479 CD302Q8IX05 232 aa12.83□□□□□ -0.36
APTX-227ENST00000485479 MLKLQ8NB16 471 aa12.83□□□□□ -0.36
APTX-227ENST00000485479 CXorf38Q8TB03 319 aa12.83□□□□□ -0.36
APTX-227ENST00000485479 ANKRD36BP1Q96IX9 119 aa12.83□□□□□ -0.36
APTX-227ENST00000485479 PRDM6Q9NQX0 595 aa12.83□□□□□ -0.36
APTX-227ENST00000485479 PUF60Q9UHX1 559 aaKnown RBP12.83□□□□□ -0.36
APTX-227ENST00000485479 SOD2P04179 222 aa12.82□□□□□ -0.36
APTX-227ENST00000485479 EPB41P11171 864 aaKnown RBP12.82□□□□□ -0.36
APTX-227ENST00000485479 LILRA4P59901 499 aa12.82□□□□□ -0.36
APTX-227ENST00000485479 NFIL3Q16649 462 aa12.82□□□□□ -0.36
APTX-227ENST00000485479 KIAA1841Q6NSI8 718 aa12.82□□□□□ -0.36
APTX-227ENST00000485479 DCLRE1AQ6PJP8 1040 aa12.82□□□□□ -0.36
APTX-227ENST00000485479 TRAPPC11Q7Z392 1133 aa12.82□□□□□ -0.36
APTX-227ENST00000485479 FEZF2Q8TBJ5 459 aa12.82□□□□□ -0.36
APTX-227ENST00000485479 RIN2Q8WYP3 895 aaPredicted RBP12.82□□□□□ -0.36
APTX-227ENST00000485479 RSPH1Q8WYR4 309 aa12.82□□□□□ -0.36
APTX-227ENST00000485479 RWDD2AQ9UIY3 292 aa12.82□□□□□ -0.36
APTX-227ENST00000485479 ANO9A1A5B4 782 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 BICDL2A1A5D9 508 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 PIRO00625 290 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 XPOTO43592 962 aaKnown RBP12.81□□□□□ -0.36
APTX-227ENST00000485479 HCRTO43612 131 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 CXCL14O95715 111 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 EFEMP2O95967 443 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 TNNC2P02585 160 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 NRIP1P48552 1158 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 SKIV2LQ15477 1246 aaKnown RBP12.81□□□□□ -0.36
APTX-227ENST00000485479 PTPN14Q15678 1187 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 DUOXA2Q1HG44 320 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 CCDC40Q4G0X9 1142 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 SPOPLQ6IQ16 392 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 LLGL2Q6P1M3 1020 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 ZC3H3Q8IXZ2 948 aaKnown RBP12.81□□□□□ -0.36
APTX-227ENST00000485479 RNF168Q8IYW5 571 aaPredicted RBP12.81□□□□□ -0.36
APTX-227ENST00000485479 BORCS6Q96GS4 357 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 UROC1Q96N76 676 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 PI4K2AQ9BTU6 479 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 DERAQ9Y315 318 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 MUC3AQ02505 3323 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 C2orf71A6NGG8 1288 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 LINC01565O15544 149 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 ADAM12O43184 909 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 URODP06132 367 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 KRT13P13646 458 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 CYP3A5P20815 502 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 RPL9P32969 192 aaKnown RBP12.81□□□□□ -0.36
APTX-227ENST00000485479 MYL6P60660 151 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 STX1AQ16623 288 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 PTPROQ16827 1216 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 ZSCAN23Q3MJ62 389 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 ANO6Q4KMQ2 910 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 CBWD6Q4V339 395 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 CBWD3Q5JTY5 395 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 CBWD5Q5RIA9 395 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 RSPO2Q6UXX9 243 aaPredicted RBP12.81□□□□□ -0.36
APTX-227ENST00000485479 DSTYKQ6XUX3 929 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 SV2AQ7L0J3 742 aa12.81□□□□□ -0.36
APTX-227ENST00000485479 CACTINQ8WUQ7 758 aaKnown RBP12.81□□□□□ -0.36
APTX-227ENST00000485479 SYAP1Q96A49 352 aaPredicted RBP12.81□□□□□ -0.36
APTX-227ENST00000485479 DDX27Q96GQ7 796 aaKnown RBP12.81□□□□□ -0.36
APTX-227ENST00000485479 SAMSN1Q9NSI8 373 aaKnown RBP12.81□□□□□ -0.36
APTX-227ENST00000485479 TSC2P49815 1807 aa12.8□□□□□ -0.36
APTX-227ENST00000485479 FSCN2O14926 492 aa12.8□□□□□ -0.36
APTX-227ENST00000485479 PHACTR2O75167 634 aa12.8□□□□□ -0.36
APTX-227ENST00000485479 VNN1O95497 513 aa12.8□□□□□ -0.36
APTX-227ENST00000485479 SPATA31D3P0C874 917 aa12.8□□□□□ -0.36
APTX-227ENST00000485479 CTSAP10619 480 aa12.8□□□□□ -0.36
APTX-227ENST00000485479 GLUD2P49448 558 aa12.8□□□□□ -0.36
APTX-227ENST00000485479 MYBPC2Q14324 1141 aa12.8□□□□□ -0.36
APTX-227ENST00000485479 TPD52L1Q16890 204 aaPredicted RBP12.8□□□□□ -0.36
APTX-227ENST00000485479 USP41Q3LFD5 358 aa12.8□□□□□ -0.36
APTX-227ENST00000485479 SPATA31D4Q6ZUB0 917 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms