RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 KCNH3Q9ULD8 1083 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 SPO11Q9Y5K1 396 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 BAHCC1Q9P281 2608 aa6.35□□□□□ -1.39
NHLRC3-205ENST00000485407 PLIN4Q96Q06 1357 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 A0A0U1RQG5 324 aaPredicted RBP6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 ZNF213O14771 459 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 WNT9AO14904 365 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 KDM1AO60341 852 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 FURINP09958 794 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 CYP2D6P10635 497 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 HOXA7P31268 230 aaPredicted RBP6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 GRK3P35626 688 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 CTSKP43235 329 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 PHC1P78364 1004 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 SMAD3P84022 425 aaKnown RBP6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 MOGSQ13724 837 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 RAB3GAP1Q15042 981 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 SMAD2Q15796 467 aaKnown RBP6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 IMMTQ16891 758 aaKnown RBP6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 CCDC178Q5BJE1 867 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 ATAT1Q5SQI0 421 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 AKNAD1Q5T1N1 836 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 L1TD1Q5T7N2 865 aaKnown RBP6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 VPS53Q5VIR6 699 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 LILRA6Q6PI73 481 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 MMS22LQ6ZRQ5 1243 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 MFSD6Q6ZSS7 791 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 KIAA1211Q6ZU35 1233 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 FRMD7Q6ZUT3 714 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 STK11IPQ8N1F8 1099 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 ZNF610Q8N9Z0 462 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 C2CD4AQ8NCU7 369 aaPredicted RBP6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 MAFAQ8NHW3 353 aaPredicted RBP6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 DIS3LQ8TF46 1054 aaKnown RBP6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 LPAR1Q92633 364 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 MAP4K1Q92918 833 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 HPS3Q969F9 1004 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 PARK7Q99497 189 aaKnown RBP6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 P2RX7Q99572 595 aaKnown RBP6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 PTPN18Q99952 460 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 GTPBP4Q9BZE4 634 aaKnown RBP6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 ZDHHC5Q9C0B5 715 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 KIAA1683Q9H0B3 1180 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 SP110Q9HB58 689 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 TCP11L1Q9NUJ3 509 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 TMOD4Q9NZQ9 345 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 NYAP2Q9P242 653 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 DGKBQ9Y6T7 804 aa6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 GREB1LQ9C091 1923 aaPredicted RBP6.34□□□□□ -1.39
NHLRC3-205ENST00000485407 CYP2D7A0A087X1C5 515 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 NPHP3-ACAD11A0A0J9YXS1 232 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 BTBD19C9JJ37 291 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 IGF2BP3O00425 579 aaKnown RBP eCLIP6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 MPHOSPH10O00566 681 aaKnown RBP6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 TLR2O60603 784 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 POU2F2P09086 479 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 TSPY3P0CV98 308 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 TSPY8P0CW00 308 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 AKR1B1P15121 316 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 GUCY1A2P33402 732 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 NOVP48745 357 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 FAM193AP78312 1265 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 JAG1P78504 1218 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 IRF9Q00978 393 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 ICA1Q05084 483 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 SEPT2Q15019 361 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 ARHGEF6Q15052 776 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 PDCD1Q15116 288 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 CLEC16AQ2KHT3 1053 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 UAP1L1Q3KQV9 507 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 OSTM1Q86WC4 334 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 TDHQ8IZJ6 230 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 SLC44A5Q8NCS7 719 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 PPP1R35Q8TAP8 253 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 CCT6BQ92526 530 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 TRIM63Q969Q1 353 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 PGBD4Q96DM1 585 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 TTC14Q96N46 770 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 TBCBQ99426 244 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 APOL5Q9BWW9 433 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 KRT23Q9C075 422 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 TRMT13Q9NUP7 481 aaKnown RBP6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 PPARGC1AQ9UBK2 798 aaKnown RBP6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 AGTPBP1Q9UPW5 1226 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 TMX2Q9Y320 296 aa6.33□□□□□ -1.4
NHLRC3-205ENST00000485407 LAMA4Q16363 1823 aa6.32□□□□□ -1.4
NHLRC3-205ENST00000485407 LOC285556D6RIA3 1793 aa6.32□□□□□ -1.4
NHLRC3-205ENST00000485407 IGKV6D-41A0A0C4DH26 115 aa6.32□□□□□ -1.4
NHLRC3-205ENST00000485407 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.32□□□□□ -1.4
NHLRC3-205ENST00000485407 LCHNA4D1U4 455 aa6.32□□□□□ -1.4
NHLRC3-205ENST00000485407 TSPY2A6NKD2 308 aa6.32□□□□□ -1.4
NHLRC3-205ENST00000485407 RBAK-RBAKDNI3L0D1 243 aa6.32□□□□□ -1.4
NHLRC3-205ENST00000485407 PDHXO00330 501 aa6.32□□□□□ -1.4
NHLRC3-205ENST00000485407 TIAF1O95411 115 aa6.32□□□□□ -1.4
NHLRC3-205ENST00000485407 TTLL1O95922 423 aa6.32□□□□□ -1.4
NHLRC3-205ENST00000485407 HRGP04196 525 aa6.32□□□□□ -1.4
NHLRC3-205ENST00000485407 PAMP19021 973 aa6.32□□□□□ -1.4
NHLRC3-205ENST00000485407 TPP2P29144 1249 aaPredicted RBP6.32□□□□□ -1.4
NHLRC3-205ENST00000485407 GCLCP48506 637 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms