RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 KIAA1024Q9UPX6 916 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 INSL5Q9Y5Q6 135 aa14.26□□□□□ -0.13
HDAC6-227ENST00000485102 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-227ENST00000485102 SEC24AO95486 1093 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 TDGF1P13385 188 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 PSMC3P17980 439 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 CCR2P41597 374 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 NRLP54845 237 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 PEX3P56589 373 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 MTAPQ13126 283 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 ZNF568Q3ZCX4 644 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 FAM78AQ5JUQ0 283 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 CYP4A22Q5TCH4 519 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 KCTD17Q8N5Z5 321 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 BEST2Q8NFU1 509 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 DEPDC1BQ8WUY9 529 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 SMARCD2Q92925 531 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 CORO1BQ9BR76 489 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 OXCT2Q9BYC2 517 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-227ENST00000485102 RAB34Q9BZG1 259 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 GPR88Q9GZN0 384 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 CYP4F11Q9HBI6 524 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 POLD4Q9HCU8 107 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 ZNF334Q9HCZ1 680 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-227ENST00000485102 SMG5Q9UPR3 1016 aaKnown RBP14.25□□□□□ -0.13
HDAC6-227ENST00000485102 DNM3Q9UQ16 869 aa14.25□□□□□ -0.13
HDAC6-227ENST00000485102 CCDC169A6NNP5 214 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 MOSPD3O75425 235 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 U2AF2P26368 475 aaKnown RBP eCLIP14.24□□□□□ -0.131e-7■■□□□ 14.2
HDAC6-227ENST00000485102 FOSBP53539 338 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 GUCY1B3Q02153 619 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 LMNB2Q03252 620 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 DMP1Q13316 513 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-227ENST00000485102 IQCEQ6IPM2 695 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 MPZL3Q6UWV2 235 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 C1orf186Q6ZWK4 172 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 PDZD4Q76G19 769 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-227ENST00000485102 ELMOD1Q8N336 334 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 APPL2Q8NEU8 664 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 KCNN1Q92952 543 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 E2F7Q96AV8 911 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 TCEAL4Q96EI5 215 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 DRC1Q96MC2 740 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 TIPINQ9BVW5 301 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 TARS2Q9BW92 718 aaKnown RBP14.24□□□□□ -0.13
HDAC6-227ENST00000485102 BRD9Q9H8M2 597 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 DDX19AQ9NUU7 478 aaKnown RBP14.24□□□□□ -0.13
HDAC6-227ENST00000485102 LIMCH1Q9UPQ0 1083 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 NUB1Q9Y5A7 615 aa14.24□□□□□ -0.13
HDAC6-227ENST00000485102 CNOT1A5YKK6 2376 aaKnown RBP14.23□□□□□ -0.13
HDAC6-227ENST00000485102 LAD1O00515 517 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 MEFVO15553 781 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-227ENST00000485102 TOM1L1O75674 476 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 OAZ2O95190 189 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 ATXN1P54253 815 aaKnown RBP14.23□□□□□ -0.13
HDAC6-227ENST00000485102 HMGN5P82970 282 aaKnown RBP14.23□□□□□ -0.13
HDAC6-227ENST00000485102 MAPK7Q13164 816 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 PPP2R5DQ14738 602 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 SLC10A6Q3KNW5 377 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 CTXN3Q4LDR2 81 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 ZNF280DQ6N043 979 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 RINT1Q6NUQ1 792 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 C1orf228Q6PIY5 440 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 VITQ6UXI7 678 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 MFSD6LQ8IWD5 586 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 CELF5Q8N6W0 485 aaKnown RBP14.23□□□□□ -0.13
HDAC6-227ENST00000485102 SPIRE2Q8WWL2 714 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 DDX12PQ92771 950 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 MSANTD3Q96H12 275 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 ZNF512Q96ME7 567 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-227ENST00000485102 TCHPQ9BT92 498 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 PLEKHA5Q9HAU0 1116 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 KMT5AQ9NQR1 393 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 CEP72Q9P209 647 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 NOL7Q9UMY1 257 aaKnown RBP14.23□□□□□ -0.13
HDAC6-227ENST00000485102 PCDHB8Q9UN66 801 aa14.23□□□□□ -0.13
HDAC6-227ENST00000485102 COL4A2P08572 1712 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 M0QZQ0 153 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 ARNTLO00327 626 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 NRG2O14511 850 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-227ENST00000485102 LRP3O75074 770 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 HIP1RO75146 1068 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 GUCY2CP25092 1073 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 LRPAP1P30533 357 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 PRPHP41219 470 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 AARSP49588 968 aaKnown RBP eCLIP14.22□□□□□ -0.13
HDAC6-227ENST00000485102 CCR3P51677 355 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 OSTNP61366 133 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 PTGDRQ13258 359 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 TSSK4Q6SA08 328 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 ZPBP2Q6X784 338 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 SNX29Q8TEQ0 813 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 FAM3CQ92520 227 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 C18orf25Q96B23 403 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-227ENST00000485102 ZSWIM3Q96MP5 696 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 TBC1D32Q96NH3 1257 aa14.22□□□□□ -0.13
HDAC6-227ENST00000485102 PDCD11Q14690 1871 aaKnown RBP14.22□□□□□ -0.13
HDAC6-227ENST00000485102 E9PMD0 336 aa14.21□□□□□ -0.13
HDAC6-227ENST00000485102 PAPSS2O95340 614 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-227ENST00000485102 CHRNB1P11230 501 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms