RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 NETO1Q8TDF5 533 aa12.63□□□□□ -0.39
COL13A1-209ENST00000484990 CSGALNACT1Q8TDX6 532 aa12.63□□□□□ -0.39
COL13A1-209ENST00000484990 GTF3C6Q969F1 213 aa12.63□□□□□ -0.39
COL13A1-209ENST00000484990 ACO2Q99798 780 aaKnown RBP12.63□□□□□ -0.39
COL13A1-209ENST00000484990 TMEM134Q9H6X4 195 aa12.63□□□□□ -0.39
COL13A1-209ENST00000484990 POLD4Q9HCU8 107 aa12.63□□□□□ -0.39
COL13A1-209ENST00000484990 AFF4Q9UHB7 1163 aaKnown RBP12.63□□□□□ -0.39
COL13A1-209ENST00000484990 FBXL5Q9UKA1 691 aa12.63□□□□□ -0.39
COL13A1-209ENST00000484990 STK24Q9Y6E0 443 aa12.63□□□□□ -0.39
COL13A1-209ENST00000484990 PIAS3Q9Y6X2 628 aa12.63□□□□□ -0.39
COL13A1-209ENST00000484990 WNT7AO00755 349 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 KRT37O76014 449 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 SEC24AO95486 1093 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 ADRB1P08588 477 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 OR52Z1P0C646 297 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 MYL4P12829 197 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 TDGF1P13385 188 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 KCNE1P15382 129 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 CCT6AP40227 531 aaKnown RBP12.62□□□□□ -0.39
COL13A1-209ENST00000484990 SOX4Q06945 474 aaPredicted RBP12.62□□□□□ -0.39
COL13A1-209ENST00000484990 SIM2Q14190 667 aaPredicted RBP12.62□□□□□ -0.39
COL13A1-209ENST00000484990 ZNF174Q15697 407 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 LPAL2Q16609 132 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 ZNF568Q3ZCX4 644 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 ZNF280DQ6N043 979 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 VITQ6UXI7 678 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 ZNF687Q8N1G0 1237 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 SPEM1Q8N4L4 309 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 NSUN7Q8NE18 718 aaKnown RBP12.62□□□□□ -0.39
COL13A1-209ENST00000484990 MSANTD3Q96H12 275 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 KIFC3Q9BVG8 833 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 MRPL4Q9BYD3 311 aaKnown RBP12.62□□□□□ -0.39
COL13A1-209ENST00000484990 BHMT2Q9H2M3 363 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 C8orf33Q9H7E9 229 aaPredicted RBP12.62□□□□□ -0.39
COL13A1-209ENST00000484990 TRPV4Q9HBA0 871 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 PARD6AQ9NPB6 346 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 ASAH2Q9NR71 780 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 KCNG1Q9UIX4 513 aa12.62□□□□□ -0.39
COL13A1-209ENST00000484990 RBM19Q9Y4C8 960 aaKnown RBP12.62□□□□□ -0.39
COL13A1-209ENST00000484990 CITO14578 2027 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 SLC30A4O14863 429 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 MCF2P10911 925 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 CHRNB1P11230 501 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 CCNE1P24864 410 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 MCM4P33991 863 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 VIPR2P41587 438 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 CCR2P41597 374 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 FOSBP53539 338 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 TWF1Q12792 350 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 LRRC32Q14392 662 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 PDIA5Q14554 519 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 CEP120Q8N960 986 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 ZSCAN18Q8TBC5 510 aaPredicted RBP12.61□□□□□ -0.39
COL13A1-209ENST00000484990 DDX1Q92499 740 aaKnown RBP12.61□□□□□ -0.39
COL13A1-209ENST00000484990 CHAMP1Q96JM3 812 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 SUSD3Q96L08 255 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 ZSWIM3Q96MP5 696 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 OXCT2Q9BYC2 517 aaPredicted RBP12.61□□□□□ -0.39
COL13A1-209ENST00000484990 CDT1Q9H211 546 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 SLITRK6Q9H5Y7 841 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 PTPRHQ9HD43 1115 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 SEMA4GQ9NTN9 838 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 CEP72Q9P209 647 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 LRWD1Q9UFC0 647 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 KIAA1024Q9UPX6 916 aa12.61□□□□□ -0.39
COL13A1-209ENST00000484990 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.61□□□□□ -0.39
COL13A1-209ENST00000484990 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.6□□□□□ -0.39
COL13A1-209ENST00000484990 HEPACAM2A8MVW5 462 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 DPYSL4O14531 572 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 CHADO15335 359 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 CPB1P15086 417 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 NPTX2P47972 431 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 KPNA1P52294 538 aaPredicted RBP12.6□□□□□ -0.39
COL13A1-209ENST00000484990 EPHA5P54756 1037 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 PEX3P56589 373 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 DMP1Q13316 513 aaPredicted RBP12.6□□□□□ -0.39
COL13A1-209ENST00000484990 PLD1Q13393 1074 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 CSRP2Q16527 193 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 PPM1JQ5JR12 505 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 DGKKQ5KSL6 1271 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 LONP2Q86WA8 852 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 HS6ST3Q8IZP7 471 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 FAM200AQ8TCP9 573 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 DDX12PQ92771 950 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 ZMAT2Q96NC0 199 aaKnown RBP12.6□□□□□ -0.39
COL13A1-209ENST00000484990 TBC1D32Q96NH3 1257 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 TARS2Q9BW92 718 aaKnown RBP12.6□□□□□ -0.39
COL13A1-209ENST00000484990 RAB34Q9BZG1 259 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 C17orf75Q9HAS0 396 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 KMT5AQ9NQR1 393 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 CNTN3Q9P232 1028 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 DNM3Q9UQ16 869 aa12.6□□□□□ -0.39
COL13A1-209ENST00000484990 TICRRQ7Z2Z1 1910 aa12.59□□□□□ -0.39
COL13A1-209ENST00000484990 HRO43593 1189 aa12.59□□□□□ -0.39
COL13A1-209ENST00000484990 MOSPD3O75425 235 aa12.59□□□□□ -0.39
COL13A1-209ENST00000484990 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
COL13A1-209ENST00000484990 EPHB3P54753 998 aa12.59□□□□□ -0.39
COL13A1-209ENST00000484990 SATB1Q01826 763 aa12.59□□□□□ -0.39
COL13A1-209ENST00000484990 STRN3Q13033 797 aa12.59□□□□□ -0.39
COL13A1-209ENST00000484990 PTGDRQ13258 359 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms