RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 CLNKQ7Z7G1 428 aa5.52□□□□□ -1.53
SMC4-215ENST00000484799 PRIMA1Q86XR5 153 aa5.52□□□□□ -1.53
SMC4-215ENST00000484799 FAXDC2Q96IV6 333 aa5.52□□□□□ -1.53
SMC4-215ENST00000484799 UNKLQ9H9P5 680 aaKnown RBP5.52□□□□□ -1.53
SMC4-215ENST00000484799 ZNF277Q9NRM2 450 aaPredicted RBP5.52□□□□□ -1.53
SMC4-215ENST00000484799 KCTD5Q9NXV2 234 aa5.52□□□□□ -1.53
SMC4-215ENST00000484799 ATP8A1Q9Y2Q0 1164 aa5.52□□□□□ -1.53
SMC4-215ENST00000484799 CCDC151A5D8V7 595 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 TRIM75PA6NK02 468 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 K7ESF4 209 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 WNT10BO00744 389 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 GRM6O15303 877 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 YY2O15391 372 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 AGFG2O95081 481 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 MT-CO1P00395 513 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 GUCY2FP51841 1108 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 CDC42EP1Q00587 391 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 PIGFQ07326 219 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 GEN1Q17RS7 908 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 DACT2Q5SW24 774 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 KAZNQ674X7 775 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 SP5Q6BEB4 398 aaPredicted RBP5.51□□□□□ -1.53
SMC4-215ENST00000484799 ZGPATQ8N5A5 531 aaKnown RBP5.51□□□□□ -1.53
SMC4-215ENST00000484799 OR2I1PQ8NGU4 316 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 ZNF384Q8TF68 577 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 TMEM125Q96AQ2 219 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 FBXL20Q96IG2 436 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 CLPTM1LQ96KA5 538 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 SLC17A6Q9P2U8 582 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 CDYLQ9Y232 598 aa5.51□□□□□ -1.53
SMC4-215ENST00000484799 TOR1BO14657 336 aa5.5□□□□□ -1.53
SMC4-215ENST00000484799 CDK4P11802 303 aa5.5□□□□□ -1.53
SMC4-215ENST00000484799 FOLR3P41439 243 aa5.5□□□□□ -1.53
SMC4-215ENST00000484799 PTH2RP49190 550 aa5.5□□□□□ -1.53
SMC4-215ENST00000484799 CLK3P49761 638 aaKnown RBP5.5□□□□□ -1.53
SMC4-215ENST00000484799 C21orf58P58505 322 aa5.5□□□□□ -1.53
SMC4-215ENST00000484799 RPS7P62081 194 aaKnown RBP5.5□□□□□ -1.53
SMC4-215ENST00000484799 KIF23Q02241 960 aaPredicted RBP5.5□□□□□ -1.53
SMC4-215ENST00000484799 SF3B3Q15393 1217 aaKnown RBP5.5□□□□□ -1.53
SMC4-215ENST00000484799 EFCAB2Q5VUJ9 269 aa5.5□□□□□ -1.53
SMC4-215ENST00000484799 GRASPQ7Z6J2 395 aaPredicted RBP5.5□□□□□ -1.53
SMC4-215ENST00000484799 TOR1AIP2Q8NFQ8 470 aa5.5□□□□□ -1.53
SMC4-215ENST00000484799 JADE3Q92613 823 aa5.5□□□□□ -1.53
SMC4-215ENST00000484799 VOPP1Q96AW1 172 aa5.5□□□□□ -1.53
SMC4-215ENST00000484799 NACC2Q96BF6 587 aa5.5□□□□□ -1.53
SMC4-215ENST00000484799 BBC3Q96PG8 261 aaPredicted RBP5.5□□□□□ -1.53
SMC4-215ENST00000484799 IMPG2Q9BZV3 1241 aa5.5□□□□□ -1.53
SMC4-215ENST00000484799 INTS13Q9NVM9 706 aa5.5□□□□□ -1.53
SMC4-215ENST00000484799 GNL3LQ9NVN8 582 aaKnown RBP5.5□□□□□ -1.53
SMC4-215ENST00000484799 IGLV2-14P01704 120 aa5.49□□□□□ -1.53
SMC4-215ENST00000484799 WASP42768 502 aa5.49□□□□□ -1.53
SMC4-215ENST00000484799 CACNA2D1P54289 1103 aa5.49□□□□□ -1.53
SMC4-215ENST00000484799 SIM1P81133 766 aaPredicted RBP5.49□□□□□ -1.53
SMC4-215ENST00000484799 ATP8B2P98198 1209 aa5.49□□□□□ -1.53
SMC4-215ENST00000484799 RAB39AQ14964 217 aa5.49□□□□□ -1.53
SMC4-215ENST00000484799 UAP1L1Q3KQV9 507 aa5.49□□□□□ -1.53
SMC4-215ENST00000484799 FAM153CQ494X1 144 aa5.49□□□□□ -1.53
SMC4-215ENST00000484799 SYDE2Q5VT97 1194 aa5.49□□□□□ -1.53
SMC4-215ENST00000484799 LNX2Q8N448 690 aa5.49□□□□□ -1.53
SMC4-215ENST00000484799 SLC17A8Q8NDX2 589 aa5.49□□□□□ -1.53
SMC4-215ENST00000484799 C1orf162Q8NEQ5 155 aaPredicted RBP5.49□□□□□ -1.53
SMC4-215ENST00000484799 RAB24Q969Q5 203 aa5.49□□□□□ -1.53
SMC4-215ENST00000484799 MTMR8Q96EF0 704 aa5.49□□□□□ -1.53
SMC4-215ENST00000484799 HSFX1Q9UBD0 423 aa5.49□□□□□ -1.53
SMC4-215ENST00000484799 NR2E3Q9Y5X4 410 aa5.49□□□□□ -1.53
SMC4-215ENST00000484799 SALL3Q9BXA9 1300 aa5.48□□□□□ -1.53
SMC4-215ENST00000484799 PRAMEF33A0A0G2JMD5 474 aa5.48□□□□□ -1.53
SMC4-215ENST00000484799 SHTN1A0MZ66 631 aa5.48□□□□□ -1.53
SMC4-215ENST00000484799 PRAMEF10O60809 474 aa5.48□□□□□ -1.53
SMC4-215ENST00000484799 GNAI3P08754 354 aa5.48□□□□□ -1.53
SMC4-215ENST00000484799 FCER1AP12319 257 aa5.48□□□□□ -1.53
SMC4-215ENST00000484799 KCNA2P16389 499 aa5.48□□□□□ -1.53
SMC4-215ENST00000484799 TYRP1P17643 537 aa5.48□□□□□ -1.53
SMC4-215ENST00000484799 FBLP22087 321 aaKnown RBP5.48□□□□□ -1.53
SMC4-215ENST00000484799 IARSP41252 1262 aaKnown RBP5.48□□□□□ -1.53
SMC4-215ENST00000484799 GNAI1P63096 354 aa5.48□□□□□ -1.53
SMC4-215ENST00000484799 TTC7BQ86TV6 843 aa5.48□□□□□ -1.53
SMC4-215ENST00000484799 IL17RDQ8NFM7 739 aa5.48□□□□□ -1.53
SMC4-215ENST00000484799 SSH3Q8TE77 659 aa5.48□□□□□ -1.53
SMC4-215ENST00000484799 FUBP1Q96AE4 644 aaKnown RBP5.48□□□□□ -1.53
SMC4-215ENST00000484799 SMOQ99835 787 aa5.48□□□□□ -1.53
SMC4-215ENST00000484799 R3HDMLQ9H3Y0 253 aa5.48□□□□□ -1.53
SMC4-215ENST00000484799 JKAMPQ9P055 326 aa5.48□□□□□ -1.53
SMC4-215ENST00000484799 SGTAO43765 313 aa5.47□□□□□ -1.53
SMC4-215ENST00000484799 CDK11BP21127 795 aaKnown RBP5.47□□□□□ -1.53
SMC4-215ENST00000484799 SCAPQ12770 1279 aa5.47□□□□□ -1.53
SMC4-215ENST00000484799 IL10RAQ13651 578 aa5.47□□□□□ -1.53
SMC4-215ENST00000484799 ZKSCAN2Q63HK3 967 aa5.47□□□□□ -1.53
SMC4-215ENST00000484799 MIER2Q8N344 545 aa5.47□□□□□ -1.53
SMC4-215ENST00000484799 B3GALNT2Q8NCR0 500 aa5.47□□□□□ -1.53
SMC4-215ENST00000484799 SNX19Q92543 992 aa5.47□□□□□ -1.53
SMC4-215ENST00000484799 PGBD1Q96JS3 809 aa5.47□□□□□ -1.53
SMC4-215ENST00000484799 PUS7Q96PZ0 661 aaKnown RBP5.47□□□□□ -1.53
SMC4-215ENST00000484799 CPNE5Q9HCH3 593 aa5.47□□□□□ -1.53
SMC4-215ENST00000484799 CALCOCO1Q9P1Z2 691 aa5.47□□□□□ -1.53
SMC4-215ENST00000484799 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.47□□□□□ -1.53
SMC4-215ENST00000484799 TRHDEQ9UKU6 1024 aa5.47□□□□□ -1.53
SMC4-215ENST00000484799 CCDC195A0A1B0GUA6 201 aa5.46□□□□□ -1.54
SMC4-215ENST00000484799 CCDC78A2IDD5 438 aa5.46□□□□□ -1.54
SMC4-215ENST00000484799 CCDC154A6NI56 674 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms