RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 IFNAR2P48551 515 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 LLGL1Q15334 1064 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 SNCBQ16143 134 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 CCDC38Q502W7 563 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 TDRD10Q5VZ19 366 aaKnown RBP20.93■□□□□ 0.94
LIMS2-215ENST00000484252 ZNF365Q70YC5 407 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 PHF13Q86YI8 300 aaPredicted RBP20.93■□□□□ 0.94
LIMS2-215ENST00000484252 ABRAQ8N0Z2 381 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 HERPUD2Q9BSE4 406 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 SLC12A4Q9UP95 1085 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 TMEM120BA0PK00 339 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 PIGRP01833 764 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 CUL2Q13617 745 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 XKR3Q5GH77 459 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 SLFN12LQ6IEE8 588 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 MIS18BP1Q6P0N0 1132 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 TRPM8Q7Z2W7 1104 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 EXD1Q8NHP7 514 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 MAGEC3Q8TD91 643 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 STK32BQ9NY57 414 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 ADAM22Q9P0K1 906 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 LGALS13Q9UHV8 139 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 AGO2Q9UKV8 859 aaKnown RBP20.93■□□□□ 0.94
LIMS2-215ENST00000484252 RIPK3Q9Y572 518 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 FER1L6Q2WGJ9 1857 aa20.93■□□□□ 0.94
LIMS2-215ENST00000484252 SNX3O60493 162 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 TBXAS1P24557 533 aaPredicted RBP20.92■□□□□ 0.94
LIMS2-215ENST00000484252 CETN2P41208 172 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 NOMO3P69849 1222 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 LMNB2Q03252 620 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 C1QBPQ07021 282 aaKnown RBP20.92■□□□□ 0.94
LIMS2-215ENST00000484252 PLEKHA7Q6IQ23 1121 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 ABHD15Q6UXT9 468 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 CCDC77Q9BR77 488 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 OSBPL8Q9BZF1 889 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 NINJ2Q9NZG7 142 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 CNTN6Q9UQ52 1028 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 R3HDM2Q9Y2K5 976 aaKnown RBP20.92■□□□□ 0.94
LIMS2-215ENST00000484252 ATP2C2O75185 946 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 LDHAP00338 332 aaKnown RBP20.92■□□□□ 0.94
LIMS2-215ENST00000484252 OAS1P00973 400 aaKnown RBP20.92■□□□□ 0.94
LIMS2-215ENST00000484252 RXRBP28702 533 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 RDXP35241 583 aaKnown RBP20.92■□□□□ 0.94
LIMS2-215ENST00000484252 ACTR2P61160 394 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 MAMLD1Q13495 774 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 KYNUQ16719 465 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 CIAPIN1Q6FI81 312 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 VSTM1Q6UX27 236 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 CCDC60Q8IWA6 550 aaPredicted RBP20.92■□□□□ 0.94
LIMS2-215ENST00000484252 CCHCR1Q8TD31 782 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 MAF1Q9H063 256 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 PCDHB4Q9Y5E5 795 aa20.92■□□□□ 0.94
LIMS2-215ENST00000484252 WDR81Q562E7 1941 aa20.91■□□□□ 0.94
LIMS2-215ENST00000484252 GNA15P30679 374 aa20.91■□□□□ 0.94
LIMS2-215ENST00000484252 STAT4Q14765 748 aa20.91■□□□□ 0.94
LIMS2-215ENST00000484252 EMC2Q15006 297 aa20.91■□□□□ 0.94
LIMS2-215ENST00000484252 TRIP13Q15645 432 aaPredicted RBP20.91■□□□□ 0.94
LIMS2-215ENST00000484252 GNPTABQ3T906 1256 aa20.91■□□□□ 0.94
LIMS2-215ENST00000484252 REPS2Q8NFH8 660 aa20.91■□□□□ 0.94
LIMS2-215ENST00000484252 PLCD4Q9BRC7 762 aa20.91■□□□□ 0.94
LIMS2-215ENST00000484252 C11orf70Q9BRQ4 267 aa20.91■□□□□ 0.94
LIMS2-215ENST00000484252 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.91■□□□□ 0.94
LIMS2-215ENST00000484252 SUFUQ9UMX1 484 aa20.91■□□□□ 0.94
LIMS2-215ENST00000484252 USP15Q9Y4E8 981 aaPredicted RBP20.91■□□□□ 0.94
LIMS2-215ENST00000484252 ACTL7BQ9Y614 415 aa20.91■□□□□ 0.94
LIMS2-215ENST00000484252 RGS20O76081 388 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 VNN1O95497 513 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 NLRP11P59045 1033 aaKnown RBP20.9■□□□□ 0.94
LIMS2-215ENST00000484252 SNRNP48Q6IEG0 339 aaKnown RBP20.9■□□□□ 0.94
LIMS2-215ENST00000484252 HEMGNQ9BXL5 484 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 MTFR1LQ9H019 292 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 CFAP73A6NFT4 308 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 SPATA31C2B4DYI2 1134 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 CDH16O75309 829 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 ABHD2P08910 425 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 SUPT20HL2P0C7V6 817 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 DSG3P32926 999 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 POLGP54098 1239 aaPredicted RBP20.9■□□□□ 0.94
LIMS2-215ENST00000484252 MKRN3Q13064 507 aaKnown RBP20.9■□□□□ 0.94
LIMS2-215ENST00000484252 SUPT20HL1Q3ZLR7 823 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 IZUMO3Q5VZ72 239 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 LMBRD2Q68DH5 695 aaPredicted RBP20.9■□□□□ 0.94
LIMS2-215ENST00000484252 CHADLQ6NUI6 762 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 PHLDB2Q86SQ0 1253 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 RIBC1Q8N443 379 aaPredicted RBP20.9■□□□□ 0.94
LIMS2-215ENST00000484252 CKAP2Q8WWK9 683 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 CAMKK2Q96RR4 588 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 CGRRF1Q99675 332 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 AS3MTQ9HBK9 375 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 PARVAQ9NVD7 372 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 RBAKQ9NYW8 714 aaPredicted RBP20.9■□□□□ 0.94
LIMS2-215ENST00000484252 IP6K2Q9UHH9 426 aa20.9■□□□□ 0.94
LIMS2-215ENST00000484252 PARP14Q460N5 1801 aa20.89■□□□□ 0.94
LIMS2-215ENST00000484252 SUN1O94901 812 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 CLTAP09496 248 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 NAMPTP43490 491 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 BACE1P56817 501 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 TAS2R40P59535 323 aa20.89■□□□□ 0.93
LIMS2-215ENST00000484252 ZNF280AP59817 542 aaPredicted RBP20.89■□□□□ 0.93
LIMS2-215ENST00000484252 MKRN4PQ13434 485 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms