RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 WRAP73Q9P2S5 460 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-215ENST00000484203 LRWD1Q9UFC0 647 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 SLC6A14Q9UN76 642 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 GIT1Q9Y2X7 761 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 TTC3P53804 2025 aa6.81□□□□□ -1.32
PTCD3-215ENST00000484203 A0A1B0GUA9 196 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 TMEM150BA6NC51 233 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 PI4K2BG5E9Z4 385 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 INPPL1O15357 1258 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 DCXO43602 365 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 ZC3H11AO75152 810 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTCD3-215ENST00000484203 CSDE1O75534 798 aaKnown RBP6.8□□□□□ -1.32
PTCD3-215ENST00000484203 OFD1O75665 1012 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 IGHA1P01876 353 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 SPATA31C1P0DKV0 1188 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 CYP11B2P19099 503 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 FGFR4P22455 802 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 DNAJB1P25685 340 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 HOXA11P31270 313 aaPredicted RBP6.8□□□□□ -1.32
PTCD3-215ENST00000484203 LTBRP36941 435 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 NAMPTP43490 491 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 GATMP50440 423 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 GUCY1B3Q02153 619 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 CREMQ03060 361 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 ZP2Q05996 745 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 ZNF174Q15697 407 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 MAPK6Q16659 721 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 FAM187BQ17R55 369 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 ARL6IP4Q66PJ3 421 aaKnown RBP6.8□□□□□ -1.32
PTCD3-215ENST00000484203 CES5AQ6NT32 575 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 SLC27A1Q6PCB7 646 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 CYP26C1Q6V0L0 522 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 DTHD1Q6ZMT9 781 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 LRRC55Q6ZSA7 311 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 KSR1Q8IVT5 923 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 DEPTORQ8TB45 409 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 IGSF21Q96ID5 467 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 ZNF668Q96K58 619 aaPredicted RBP6.8□□□□□ -1.32
PTCD3-215ENST00000484203 MSLNLQ96KJ4 702 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 KIF2CQ99661 725 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 ADPGKQ9BRR6 497 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 EMILIN2Q9BXX0 1053 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 NT5C3AQ9H0P0 336 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 POLR3FQ9H1D9 316 aaPredicted RBP6.8□□□□□ -1.32
PTCD3-215ENST00000484203 XPNPEP1Q9NQW7 623 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 RNF19AQ9NV58 838 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 TBC1D13Q9NVG8 400 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 ABI2Q9NYB9 513 aaPredicted RBP6.8□□□□□ -1.32
PTCD3-215ENST00000484203 KCND2Q9NZV8 630 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 DNM3Q9UQ16 869 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 FAN1Q9Y2M0 1017 aa6.8□□□□□ -1.32
PTCD3-215ENST00000484203 SCN5AQ14524 2016 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 TRIP12Q14669 1992 aaPredicted RBP6.79□□□□□ -1.32
PTCD3-215ENST00000484203 C2orf71A6NGG8 1288 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 LRRIQ4A6NIV6 560 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 H0YCG3 227 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 N4BP3O15049 544 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 MBTPS2O43462 519 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 NDUFB5O43674 189 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 TSPAN1O60635 241 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 USO1O60763 962 aaKnown RBP6.79□□□□□ -1.32
PTCD3-215ENST00000484203 CXCL14O95715 111 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 GALTP07902 379 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 CTSAP10619 480 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 CPB1P15086 417 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 GLRA2P23416 452 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 ABCD1P33897 745 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 CCT6AP40227 531 aaKnown RBP6.79□□□□□ -1.32
PTCD3-215ENST00000484203 ERVFC1P60507 584 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 SNRPNP63162 240 aaKnown RBP6.79□□□□□ -1.32
PTCD3-215ENST00000484203 PLAURQ03405 335 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 MBTD1Q05BQ5 628 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 ST3GAL1Q11201 340 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 CAPSQ13938 189 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 DCAF4L1Q3SXM0 396 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 PLPP4Q5VZY2 271 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 CDCA2Q69YH5 1023 aaPredicted RBP6.79□□□□□ -1.32
PTCD3-215ENST00000484203 MCTP1Q6DN14 999 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 PDXDC1Q6P996 788 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 HFE2Q6ZVN8 426 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 BRAPQ7Z569 592 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 RBM23Q86U06 439 aaKnown RBP6.79□□□□□ -1.32
PTCD3-215ENST00000484203 FAM35AQ86V20 835 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 VPS52Q8N1B4 723 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 BEND7Q8N7W2 519 aaPredicted RBP6.79□□□□□ -1.32
PTCD3-215ENST00000484203 IGSF22Q8N9C0 903 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 PIGOQ8TEQ8 1089 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 TMX3Q96JJ7 454 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 AK8Q96MA6 479 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 DRC1Q96MC2 740 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 RIPOR3Q96MK2 946 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 NECAB3Q96P71 396 aaPredicted RBP6.79□□□□□ -1.32
PTCD3-215ENST00000484203 COLEC11Q9BWP8 271 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 PHF7Q9BWX1 381 aaPredicted RBP6.79□□□□□ -1.32
PTCD3-215ENST00000484203 KCNH6Q9H252 994 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 TMEM60Q9H2L4 133 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.79□□□□□ -1.32
PTCD3-215ENST00000484203 MRPL17Q9NRX2 175 aaKnown RBP6.79□□□□□ -1.32
PTCD3-215ENST00000484203 CLEC1BQ9P126 229 aa6.79□□□□□ -1.32
PTCD3-215ENST00000484203 TMEM63CQ9P1W3 806 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms