RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 MTRRQ9UBK8 725 aa19.53■□□□□ 0.72
HDAC6-225ENST00000483506 USP15Q9Y4E8 981 aaPredicted RBP19.53■□□□□ 0.72
HDAC6-225ENST00000483506 ANO9A1A5B4 782 aa19.52■□□□□ 0.72
HDAC6-225ENST00000483506 GLUD1P00367 558 aa19.52■□□□□ 0.72
HDAC6-225ENST00000483506 PAX3P23760 479 aa19.52■□□□□ 0.72
HDAC6-225ENST00000483506 TKTP29401 623 aaKnown RBP19.52■□□□□ 0.72
HDAC6-225ENST00000483506 ITIH3Q06033 890 aa19.52■□□□□ 0.72
HDAC6-225ENST00000483506 KCNB1Q14721 858 aa19.52■□□□□ 0.72
HDAC6-225ENST00000483506 KNOP1Q1ED39 458 aaKnown RBP19.52■□□□□ 0.72
HDAC6-225ENST00000483506 LILRA6Q6PI73 481 aa19.52■□□□□ 0.72
HDAC6-225ENST00000483506 EFCAB13Q8IY85 973 aa19.52■□□□□ 0.72
HDAC6-225ENST00000483506 FAM212AQ96EL1 285 aa19.52■□□□□ 0.72
HDAC6-225ENST00000483506 TIGD1Q96MW7 591 aa19.52■□□□□ 0.72
HDAC6-225ENST00000483506 CLSTN3Q9BQT9 956 aa19.52■□□□□ 0.72
HDAC6-225ENST00000483506 KIAA1586Q9HCI6 787 aa19.52■□□□□ 0.72
HDAC6-225ENST00000483506 RBAKQ9NYW8 714 aaPredicted RBP19.52■□□□□ 0.72
HDAC6-225ENST00000483506 HSPBP1Q9NZL4 362 aa19.52■□□□□ 0.72
HDAC6-225ENST00000483506 NUB1Q9Y5A7 615 aa19.52■□□□□ 0.72
HDAC6-225ENST00000483506 BACE2Q9Y5Z0 518 aa19.52■□□□□ 0.72
HDAC6-225ENST00000483506 I3L4J1 428 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 M0QZQ0 153 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 DLL1O00548 723 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 PIRO00625 290 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 GUCY2FP51841 1108 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 WNT7BP56706 349 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 MRPL58Q14197 206 aaKnown RBP19.51■□□□□ 0.71
HDAC6-225ENST00000483506 C9orf57Q5W0N0 161 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 ANKS3Q6ZW76 656 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 HS2ST1Q7LGA3 356 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 CEP57Q86XR8 500 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 NELFCDQ8IXH7 590 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 TMEM130Q8N3G9 435 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 CMASQ8NFW8 434 aaPredicted RBP19.51■□□□□ 0.71
HDAC6-225ENST00000483506 GOLGA5Q8TBA6 731 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 NECAB3Q96P71 396 aaPredicted RBP19.51■□□□□ 0.71
HDAC6-225ENST00000483506 ADAM7Q9H2U9 754 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 PCIF1Q9H4Z3 704 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 SFXN1Q9H9B4 322 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 DPP7Q9UHL4 492 aa19.51■□□□□ 0.71
HDAC6-225ENST00000483506 GOLGA8IPA6NC78 632 aa19.5■□□□□ 0.71
HDAC6-225ENST00000483506 GOLGA8JA6NMD2 632 aa19.5■□□□□ 0.71
HDAC6-225ENST00000483506 TBC1D4O60343 1298 aa19.5■□□□□ 0.71
HDAC6-225ENST00000483506 RPL17P18621 184 aaKnown RBP19.5■□□□□ 0.71
HDAC6-225ENST00000483506 MCM4P33991 863 aa19.5■□□□□ 0.71
HDAC6-225ENST00000483506 ADHFE1Q8IWW8 467 aa19.5■□□□□ 0.71
HDAC6-225ENST00000483506 ELOA2Q8IYF1 753 aaPredicted RBP19.5■□□□□ 0.71
HDAC6-225ENST00000483506 CCDC47Q96A33 483 aaKnown RBP19.5■□□□□ 0.71
HDAC6-225ENST00000483506 RHOBTB2Q9BYZ6 727 aa19.5■□□□□ 0.71
HDAC6-225ENST00000483506 KCTD10Q9H3F6 313 aa19.5■□□□□ 0.71
HDAC6-225ENST00000483506 MAN1C1Q9NR34 630 aa19.5■□□□□ 0.71
HDAC6-225ENST00000483506 PCDHB8Q9UN66 801 aa19.5■□□□□ 0.71
HDAC6-225ENST00000483506 SCN1AP35498 2009 aa19.49■□□□□ 0.71
HDAC6-225ENST00000483506 C19orf67A6NJJ6 358 aa19.49■□□□□ 0.71
HDAC6-225ENST00000483506 ZNF233A6NK53 670 aa19.49■□□□□ 0.71
HDAC6-225ENST00000483506 PPEF2O14830 753 aa19.49■□□□□ 0.71
HDAC6-225ENST00000483506 TGM5O43548 720 aa19.49■□□□□ 0.71
HDAC6-225ENST00000483506 LILRA4P59901 499 aa19.49■□□□□ 0.71
HDAC6-225ENST00000483506 ZP2Q05996 745 aa19.49■□□□□ 0.71
HDAC6-225ENST00000483506 RAB33AQ14088 237 aa19.49■□□□□ 0.71
HDAC6-225ENST00000483506 VARS2Q5ST30 1063 aaKnown RBP19.49■□□□□ 0.71
HDAC6-225ENST00000483506 ELMSAN1Q6PJG2 1045 aa19.49■□□□□ 0.71
HDAC6-225ENST00000483506 PLEKHA4Q9H4M7 779 aa19.49■□□□□ 0.71
HDAC6-225ENST00000483506 DPP3Q9NY33 737 aa19.49■□□□□ 0.71
HDAC6-225ENST00000483506 TSC2P49815 1807 aa19.48■□□□□ 0.71
HDAC6-225ENST00000483506 ADAM12O43184 909 aa19.48■□□□□ 0.71
HDAC6-225ENST00000483506 CBX2Q14781 532 aaPredicted RBP19.48■□□□□ 0.71
HDAC6-225ENST00000483506 SURF1Q15526 300 aa19.48■□□□□ 0.71
HDAC6-225ENST00000483506 SLC8B1Q6J4K2 584 aa19.48■□□□□ 0.71
HDAC6-225ENST00000483506 CES5AQ6NT32 575 aa19.48■□□□□ 0.71
HDAC6-225ENST00000483506 RSPO2Q6UXX9 243 aaPredicted RBP19.48■□□□□ 0.71
HDAC6-225ENST00000483506 C15orf39Q6ZRI6 1047 aa19.48■□□□□ 0.71
HDAC6-225ENST00000483506 CBWD2Q8IUF1 395 aa19.48■□□□□ 0.71
HDAC6-225ENST00000483506 SLC9A9Q8IVB4 645 aa19.48■□□□□ 0.71
HDAC6-225ENST00000483506 XXYLT1Q8NBI6 393 aa19.48■□□□□ 0.71
HDAC6-225ENST00000483506 APPL2Q8NEU8 664 aa19.48■□□□□ 0.71
HDAC6-225ENST00000483506 CXorf38Q8TB03 319 aa19.48■□□□□ 0.71
HDAC6-225ENST00000483506 SPATA20Q8TB22 786 aa19.48■□□□□ 0.71
HDAC6-225ENST00000483506 NECTIN4Q96NY8 510 aa19.48■□□□□ 0.71
HDAC6-225ENST00000483506 POP1Q99575 1024 aaKnown RBP19.48■□□□□ 0.71
HDAC6-225ENST00000483506 FBXW11Q9UKB1 542 aa19.48■□□□□ 0.71
HDAC6-225ENST00000483506 DENND4AQ7Z401 1863 aa19.48■□□□□ 0.71
HDAC6-225ENST00000483506 H7C4K7 107 aa19.47■□□□□ 0.71
HDAC6-225ENST00000483506 TNFRSF10AO00220 468 aa19.47■□□□□ 0.71
HDAC6-225ENST00000483506 PDXKO00764 312 aa19.47■□□□□ 0.71
HDAC6-225ENST00000483506 CLIC2O15247 247 aa19.47■□□□□ 0.71
HDAC6-225ENST00000483506 OAZ2O95190 189 aa19.47■□□□□ 0.71
HDAC6-225ENST00000483506 KIF20AO95235 890 aa19.47■□□□□ 0.71
HDAC6-225ENST00000483506 SNRNP35Q16560 246 aaKnown RBP19.47■□□□□ 0.71
HDAC6-225ENST00000483506 RARS2Q5T160 578 aaKnown RBP19.47■□□□□ 0.71
HDAC6-225ENST00000483506 CYP26C1Q6V0L0 522 aa19.47■□□□□ 0.71
HDAC6-225ENST00000483506 PALB2Q86YC2 1186 aa19.47■□□□□ 0.71
HDAC6-225ENST00000483506 C12orf76Q8N812 135 aaPredicted RBP19.47■□□□□ 0.71
HDAC6-225ENST00000483506 CACTINQ8WUQ7 758 aaKnown RBP19.47■□□□□ 0.71
HDAC6-225ENST00000483506 PHF7Q9BWX1 381 aaPredicted RBP19.47■□□□□ 0.71
HDAC6-225ENST00000483506 PDE11AQ9HCR9 933 aa19.47■□□□□ 0.71
HDAC6-225ENST00000483506 DMAC2Q9NW81 257 aa19.47■□□□□ 0.71
HDAC6-225ENST00000483506 ZDHHC7Q9NXF8 308 aa19.47■□□□□ 0.71
HDAC6-225ENST00000483506 C2orf16Q68DN1 1984 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 SPTLC1O15269 473 aa19.46■□□□□ 0.71
HDAC6-225ENST00000483506 TYMPP19971 482 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms