RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 MLH1P40692 756 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 LAMB3Q13751 1172 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ITPRIPL1Q6GPH6 555 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TMED8Q6PL24 325 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TRIM72Q6ZMU5 477 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 RCOR2Q8IZ40 523 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 SLC30A5Q8TAD4 765 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 INPP5DQ92835 1189 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 MAD2L2Q9UI95 211 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CDYLQ9Y232 598 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 IREB2P48200 963 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 NLRP11P59045 1033 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ZNF200P98182 395 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ITIH4Q14624 930 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ACBD5Q5T8D3 534 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PRR5LQ6MZQ0 368 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 APLFQ8IW19 511 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 USP38Q8NB14 1042 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CASKIN2Q8WXE0 1202 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PGBD4Q96DM1 585 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 KLF6Q99612 283 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 FAM118BQ9BPY3 351 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 FUT8Q9BYC5 575 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CDV3Q9UKY7 258 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 RSPH10B2B2RC85 870 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 F8W8V4 182 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 M0R3G1 203 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 GH2P01242 217 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 RSPH10BP0C881 870 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 SESN2P58004 480 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PPP4R4Q6NUP7 873 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TMEM179Q6ZVK1 233 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PATL1Q86TB9 770 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 DPP9Q86TI2 863 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 FAM160B2Q86V87 743 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 HIC2Q96JB3 615 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PRPF18Q99633 342 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CAAP1Q9H8G2 361 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PXDNLA1KZ92 1463 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 MYO1GB0I1T2 1018 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 USP17L10C9JJH3 530 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 HSPA1AP0DMV8 641 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 HSPA1BP0DMV9 641 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 GNAT1P11488 350 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 DEFA1P59665 94 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 DEFA3P59666 94 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 SCARF1Q14162 830 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ZCWPW2Q504Y3 356 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 OTULINQ96BN8 352 aa10.04□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CIITAP33076 1130 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ITGA8P53708 1063 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 RCAN1P53805 252 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CCNA1P78396 465 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TAP1Q03518 808 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ORC2Q13416 577 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 KRT33BQ14525 404 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 KRT72Q14CN4 511 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 NKX1-1Q15270 411 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TRIM16LQ309B1 348 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 MYCBPAPQ8TBZ2 947 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ZNF341Q9BYN7 854 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 OSBPL8Q9BZF1 889 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 DCP1AQ9NPI6 582 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 AFF4Q9UHB7 1163 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 BLOC1S6Q9UL45 172 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 RICTORQ6R327 1708 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 SSU72P8A0A1W2PR75 194 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 LRRIQ3A6PVS8 624 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ZCCHC18P0CG32 403 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 KPNB1Q14974 876 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ZNF568Q3ZCX4 644 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TJAP1Q5JTD0 557 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PPP1R18Q6NYC8 613 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ADSSL1Q8N142 457 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 DDHD1Q8NEL9 900 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CPA5Q8WXQ8 436 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 HAO1Q9UJM8 370 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ARHGEF28Q8N1W1 1705 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PRR23D1E9PI22 279 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 DLGAP3O95886 979 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 PRR23D2P0DMB1 279 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 SEMA3FQ13275 785 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 NAB2Q15742 525 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 EPAS1Q99814 870 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 C10orf88Q9H8K7 445 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 HSPBP1Q9NZL4 362 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ZNF212Q9UDV6 495 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ZC3H7BQ9UGR2 993 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 MAGEA4P43358 317 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 SLC29A2Q14542 456 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CEP78Q5JTW2 689 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TTC39BQ5VTQ0 682 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 STOX1Q6ZVD7 989 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 REXO1L1PQ8IX06 675 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 KIF20BQ96Q89 1820 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 TMEM117Q9H0C3 514 aa10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 SLC16A3O15427 465 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 ABCE1P61221 599 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP2-216ENST00000483412 CHI3L2Q15782 390 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms