RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 PSPC1Q8WXF1 523 aaKnown RBP11.7□□□□□ -0.54
RPGR-208ENST00000482855 RBM15Q96T37 977 aaKnown RBP eCLIP11.7□□□□□ -0.54
RPGR-208ENST00000482855 BHMT2Q9H2M3 363 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 MMADHCQ9H3L0 296 aaPredicted RBP11.7□□□□□ -0.54
RPGR-208ENST00000482855 BCAS3Q9H6U6 928 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 NUMBLQ9Y6R0 609 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 WASF2Q9Y6W5 498 aa11.7□□□□□ -0.54
RPGR-208ENST00000482855 EIF3DO15371 548 aaKnown RBP eCLIP11.69□□□□□ -0.54
RPGR-208ENST00000482855 CYP1A1P04798 512 aaPredicted RBP11.69□□□□□ -0.54
RPGR-208ENST00000482855 SETSIPP0DME0 302 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 GAP43P17677 238 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 RTP1P59025 263 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 GSTO1P78417 241 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 MYBPC3Q14896 1274 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 SF3B3Q15393 1217 aaKnown RBP11.69□□□□□ -0.54
RPGR-208ENST00000482855 PLEKHG4Q58EX7 1191 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 CCDC62Q6P9F0 684 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 LVRNQ6Q4G3 990 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 SYCP3Q8IZU3 236 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 LRRC47Q8N1G4 583 aaKnown RBP11.69□□□□□ -0.54
RPGR-208ENST00000482855 ARHGAP24Q8N264 748 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 NLGN1Q8N2Q7 840 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 SMC1BQ8NDV3 1235 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 ZNF653Q96CK0 615 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 TTC25Q96NG3 672 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 OLFM3Q96PB7 478 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 TUBGCP5Q96RT8 1024 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 DCLK3Q9C098 648 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 JMJD4Q9H9V9 463 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 OLFML3Q9NRN5 406 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 IL1RAPL1Q9NZN1 696 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 HEY2Q9UBP5 337 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 A0A0G2JND7 137 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 SFI1A8K8P3 1242 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 PPP1R11O60927 126 aaPredicted RBP11.69□□□□□ -0.54
RPGR-208ENST00000482855 GZMAP12544 262 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 GCAP28676 217 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 CDK7P50613 346 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 DSG1Q02413 1049 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 ZBTB16Q05516 673 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 NFIL3Q16649 462 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 ERFEQ4G0M1 354 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 NCAPG2Q86XI2 1143 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 TDRPQ86YL5 185 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 CCDC89Q8N998 374 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 HAPLN3Q96S86 360 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 PCDHB18PQ96TA0 734 aa11.69□□□□□ -0.54
RPGR-208ENST00000482855 FAM13AO94988 1023 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 SPATA31C1P0DKV0 1188 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 ESRRAP11474 423 aaPredicted RBP11.68□□□□□ -0.54
RPGR-208ENST00000482855 NMT1P30419 496 aaKnown RBP11.68□□□□□ -0.54
RPGR-208ENST00000482855 LSAMPQ13449 338 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 COG2Q14746 738 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 SEPT7Q16181 437 aaKnown RBP11.68□□□□□ -0.54
RPGR-208ENST00000482855 IZUMO2Q6UXV1 221 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 NSMFQ6X4W1 530 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 RINLQ6ZS11 566 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 ADGRF4Q8IZF3 695 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 MYCT1Q8N699 235 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 RFWD2Q8NHY2 731 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 VTI1AQ96AJ9 217 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 MIS12Q9H081 205 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 SAYSD1Q9NPB0 183 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 DNAAF2Q9NVR5 837 aaKnown RBP11.68□□□□□ -0.54
RPGR-208ENST00000482855 GALNT8Q9NY28 637 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 UVRAGQ9P2Y5 699 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.68□□□□□ -0.54
RPGR-208ENST00000482855 ANKRD31Q8N7Z5 1873 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 ZSCAN9O15535 394 aaPredicted RBP11.68□□□□□ -0.54
RPGR-208ENST00000482855 CYP1A2P05177 515 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 FGFR1P11362 822 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 PPP4CP60510 307 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 SPIRE1Q08AE8 756 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 OVGP1Q12889 678 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 TBC1D9BQ66K14 1250 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 ST13P4Q8IZP2 240 aaPredicted RBP11.68□□□□□ -0.54
RPGR-208ENST00000482855 STKLD1Q8NE28 680 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 MIPOL1Q8TD10 442 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 DYDC2Q96IM9 177 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 TRIM55Q9BYV6 548 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 PREBQ9HCU5 417 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 TAS2R1Q9NYW7 299 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 GTF3C4Q9UKN8 822 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 ATF5Q9Y2D1 282 aaPredicted RBP11.68□□□□□ -0.54
RPGR-208ENST00000482855 USP17L15C9J2P7 530 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 USP17L13C9JLJ4 530 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 USP17L11C9JVI0 530 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 USP17L18D6R9N7 530 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 USP17L22D6RA61 530 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 USP17L17D6RBQ6 530 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 USP17L19D6RCP7 530 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 USP17L20D6RJB6 530 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 TYROBPO43914 113 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 PLS3P13797 630 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 ETS2P15036 469 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 PGM1P36871 562 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 SCNN1BP51168 640 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 ARFIP2P53365 341 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 CYP4A11Q02928 519 aa11.68□□□□□ -0.54
RPGR-208ENST00000482855 USP17L24Q0WX57 530 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms