RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 SLC8A3P57103 927 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 STAT4Q14765 748 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 BMT2Q1RMZ1 405 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 RASIP1Q5U651 963 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 CRELD2Q6UXH1 353 aaPredicted RBP13.46□□□□□ -0.25
VPS52-218ENST00000482399 ISLR2Q6UXK2 745 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 CHURC1Q8WUH1 139 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 DNAJC9Q8WXX5 260 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 FAM163AQ96GL9 167 aaPredicted RBP13.46□□□□□ -0.25
VPS52-218ENST00000482399 IMPG2Q9BZV3 1241 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 WHRNQ9P202 907 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 DNPEPQ9ULA0 475 aa13.46□□□□□ -0.25
VPS52-218ENST00000482399 EME2A4GXA9 379 aaPredicted RBP13.46□□□□□ -0.26
VPS52-218ENST00000482399 ARHGAP42A6NI28 874 aa13.46□□□□□ -0.26
VPS52-218ENST00000482399 P4HBP07237 508 aaKnown RBP13.46□□□□□ -0.26
VPS52-218ENST00000482399 UBTFL6P0CB48 400 aaPredicted RBP13.46□□□□□ -0.26
VPS52-218ENST00000482399 ADRA1DP25100 572 aa13.46□□□□□ -0.26
VPS52-218ENST00000482399 POLGP54098 1239 aaPredicted RBP13.46□□□□□ -0.26
VPS52-218ENST00000482399 KDSRQ06136 332 aa13.46□□□□□ -0.26
VPS52-218ENST00000482399 MTMR1Q13613 665 aa13.46□□□□□ -0.26
VPS52-218ENST00000482399 MTFR1Q15390 333 aa13.46□□□□□ -0.26
VPS52-218ENST00000482399 RHOT1Q8IXI2 618 aa13.46□□□□□ -0.26
VPS52-218ENST00000482399 CALN1Q9BXU9 219 aa13.46□□□□□ -0.26
VPS52-218ENST00000482399 TXLNGYQ9BZA5 131 aa13.46□□□□□ -0.26
VPS52-218ENST00000482399 ZFATQ9P243 1243 aa13.46□□□□□ -0.26
VPS52-218ENST00000482399 AP1G2O75843 785 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 HAUS5O94927 633 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 ZCCHC18P0CG32 403 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 MAN1A1P33908 653 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 WDR4P57081 412 aaKnown RBP13.45□□□□□ -0.26
VPS52-218ENST00000482399 OSTNP61366 133 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 GLIS1Q8NBF1 620 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 FAXDC2Q96IV6 333 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 FAM161BQ96MY7 647 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 SLC13A1Q9BZW2 595 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 RAVER2Q9HCJ3 691 aaKnown RBP13.45□□□□□ -0.26
VPS52-218ENST00000482399 AAASQ9NRG9 546 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 HEY2Q9UBP5 337 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 SEPT9Q9UHD8 586 aaPredicted RBP13.45□□□□□ -0.26
VPS52-218ENST00000482399 SPATA31A5Q5VU36 1347 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 SPATA31A7Q8IWB4 1347 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 PSMD10O75832 226 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 MT-ND3P03897 115 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 TAS2R40P59535 323 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 MTERF2Q49AM1 385 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 MIS18BP1Q6P0N0 1132 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 CENPUQ71F23 418 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 FAM13CQ8NE31 585 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 PLEKHO2Q8TD55 490 aa13.45□□□□□ -0.26
VPS52-218ENST00000482399 GNA15P30679 374 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 EFTUD2Q15029 972 aaKnown RBP eCLIP13.44□□□□□ -0.261e-6■■■■□ 22.8
VPS52-218ENST00000482399 BSPRYQ5W0U4 402 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 C3orf62Q6ZUJ4 267 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 CRAMP1Q96RY5 1269 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 VCXQ9H320 206 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 PPARGC1AQ9UBK2 798 aaKnown RBP13.44□□□□□ -0.26
VPS52-218ENST00000482399 ADAMTSL3P82987 1691 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 IGKV6D-41A0A0C4DH26 115 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 PIK3R2O00459 728 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 NFIBO00712 420 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 CAPN9O14815 690 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 PPP1R12AO14974 1030 aaPredicted RBP13.44□□□□□ -0.26
VPS52-218ENST00000482399 RAD17O75943 681 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 KRT19P08727 400 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 GZMAP12544 262 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 RFC5P40937 340 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 SATB1Q01826 763 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 KLC1Q07866 573 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 SLC1A5Q15758 541 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 CFAP157Q5JU67 520 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 DAW1Q8N136 415 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 BBOF1Q8ND07 529 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 JDP2Q8WYK2 163 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 BORCS6Q96GS4 357 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 MCEEQ96PE7 176 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 GBP5Q96PP8 586 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 DDX50Q9BQ39 737 aaKnown RBP13.44□□□□□ -0.26
VPS52-218ENST00000482399 SHCBP1LQ9BZQ2 653 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 EBF2Q9HAK2 575 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 CHMP2BQ9UQN3 213 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 CHKBQ9Y259 395 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 MYH14Q7Z406 1995 aaKnown RBP13.44□□□□□ -0.26
VPS52-218ENST00000482399 GNAT1P11488 350 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 PTDSS1P48651 473 aaKnown RBP13.44□□□□□ -0.26
VPS52-218ENST00000482399 RARRES1P49788 294 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 ARFIP2P53365 341 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 JAG1P78504 1218 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 MGAT5Q09328 741 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 MOXD1Q6UVY6 613 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 ZBTB33Q86T24 672 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 IL31RAQ8NI17 732 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 MAGEC3Q8TD91 643 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 CFAP36Q96G28 342 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 RNPEPL1Q9HAU8 725 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 KIAA1586Q9HCI6 787 aa13.44□□□□□ -0.26
VPS52-218ENST00000482399 FBXO6Q9NRD1 293 aaPredicted RBP13.44□□□□□ -0.26
VPS52-218ENST00000482399 FRMPD4Q14CM0 1322 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 TOGARAM1Q9Y4F4 1720 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 BCORQ6W2J9 1755 aa13.43□□□□□ -0.26
VPS52-218ENST00000482399 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms