RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 ZBTB6Q15916 424 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 CBWD6Q4V339 395 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 TCP11X2Q5H9J9 407 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 CBWD3Q5JTY5 395 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 CBWD5Q5RIA9 395 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 CDKAL1Q5VV42 579 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 C9orf57Q5W0N0 161 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 TRAPPC11Q7Z392 1133 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 C3orf58Q8NDZ4 430 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 ARNTL2Q8WYA1 636 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 SLC35C1Q96A29 364 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 VPS16Q9H269 839 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 AAASQ9NRG9 546 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 PCDHB12Q9Y5F1 795 aa14.28□□□□□ -0.12
HDAC1-208ENST00000482310 TRANK1O15050 2925 aa14.27□□□□□ -0.12
HDAC1-208ENST00000482310 B3GAT3O94766 335 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 AFPP02771 609 aaKnown RBP14.27□□□□□ -0.13
HDAC1-208ENST00000482310 ALDH2P05091 517 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 LINC00271P0C7V0 271 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 CA8P35219 290 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 BRCC3P46736 316 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 TPM4P67936 248 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 KCNH2Q12809 1159 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 KRT31Q15323 416 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 UPP1Q16831 310 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 EPC2Q52LR7 807 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 NT5DC4Q86YG4 428 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 TRIM59Q8IWR1 403 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 FAM161BQ96MY7 647 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 TGS1Q96RS0 853 aaKnown RBP14.27□□□□□ -0.13
HDAC1-208ENST00000482310 TMEM175Q9BSA9 504 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 TUBGCP2Q9BSJ2 902 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 PI4K2AQ9BTU6 479 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 COL25A1Q9BXS0 654 aaPredicted RBP14.27□□□□□ -0.13
HDAC1-208ENST00000482310 HSD3B7Q9H2F3 369 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 ALG13Q9NP73 1137 aaKnown RBP14.27□□□□□ -0.13
HDAC1-208ENST00000482310 MARCH5Q9NX47 278 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 SIX4Q9UIU6 781 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 NUB1Q9Y5A7 615 aa14.27□□□□□ -0.13
HDAC1-208ENST00000482310 STX10O60499 249 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 LRRN2O75325 713 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 TADA2AO75478 443 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 VNN1O95497 513 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 HLA-DRAP01903 254 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 C4BPAP04003 597 aaKnown RBP14.26□□□□□ -0.13
HDAC1-208ENST00000482310 CYP3A5P20815 502 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 FMO5P49326 533 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 MARSP56192 900 aaKnown RBP14.26□□□□□ -0.13
HDAC1-208ENST00000482310 MYL6P60660 151 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 NCOA4Q13772 614 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 MAN2A1Q16706 1144 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 SCARA5Q6ZMJ2 495 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 SV2AQ7L0J3 742 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 GAS2L3Q86XJ1 694 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 SLC39A11Q8N1S5 342 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 KLHL23Q8NBE8 558 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 FBXO22Q8NEZ5 403 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 ANKRD20A12PQ8NF67 263 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 TAS1R2Q8TE23 839 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 GDPD5Q8WTR4 605 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 RSPH1Q8WYR4 309 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 CLP1Q92989 425 aaKnown RBP14.26□□□□□ -0.13
HDAC1-208ENST00000482310 TMEM169Q96HH4 297 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 B3GALT6Q96L58 329 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 UROC1Q96N76 676 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 COLEC11Q9BWP8 271 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 RBSNQ9H1K0 784 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 TMEM8AQ9HCN3 771 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 SPG21Q9NZD8 308 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 ITGA11Q9UKX5 1188 aa14.26□□□□□ -0.13
HDAC1-208ENST00000482310 PLXNA3P51805 1871 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 MYO7AQ13402 2215 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 PRUNE2Q8WUY3 3088 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 EPOPA6NHQ4 379 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 RFXAPO00287 272 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 FGF18O76093 207 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 CAVIN2O95810 425 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 CST3P01034 146 aaPredicted RBP14.25□□□□□ -0.13
HDAC1-208ENST00000482310 TPM2P07951 284 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 ZNF18P17022 549 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 EEF1GP26641 437 aaKnown RBP14.25□□□□□ -0.13
HDAC1-208ENST00000482310 LRPAP1P30533 357 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 BMPR1AP36894 532 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 CLDN10P78369 228 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 RBP5P82980 135 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 PLCB2Q00722 1185 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 LRMPQ12912 555 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 PTPN21Q16825 1174 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 KRT39Q6A163 491 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 SPOPLQ6IQ16 392 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 CEP57Q86XR8 500 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 DDX27Q96GQ7 796 aaKnown RBP14.25□□□□□ -0.13
HDAC1-208ENST00000482310 IGSF21Q96ID5 467 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 ZNF560Q96MR9 790 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 TSPAN18Q96SJ8 248 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 CRACR2AQ9BSW2 395 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 ADAM28Q9UKQ2 775 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 VCANP13611 3396 aa14.25□□□□□ -0.13
HDAC1-208ENST00000482310 ANO9A1A5B4 782 aa14.24□□□□□ -0.13
HDAC1-208ENST00000482310 C2CD2LO14523 706 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms