RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 LRRC53A6NM62 1247 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 PIRO00625 290 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 HOXA2O43364 376 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 EFCAB14O75071 495 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 OFD1O75665 1012 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 KRT19P08727 400 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 CCDC172P0C7W6 258 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 ITGB8P26012 769 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 POLR2BP30876 1174 aaKnown RBP13.44□□□□□ -0.26
IFT88-206ENST00000482172 RPL9P32969 192 aaKnown RBP13.44□□□□□ -0.26
IFT88-206ENST00000482172 MLH1P40692 756 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 PNPLA4P41247 253 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 GOLGA8FQ08AF8 430 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 GOLGA8DPQ0D2H9 430 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 LRMPQ12912 555 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 MYO1EQ12965 1108 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 GRIK3Q13003 919 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 RAPGEF1Q13905 1077 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 DRAP1Q14919 205 aaPredicted RBP13.44□□□□□ -0.26
IFT88-206ENST00000482172 ZNF699Q32M78 642 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 GLRA4Q5JXX5 417 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 SFMBT2Q5VUG0 894 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 GJB7Q6PEY0 223 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 GLB1LQ6UWU2 654 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 DEFB128Q7Z7B8 93 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 TMTC1Q8IUR5 882 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 TMEM139Q8IV31 216 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 CRIPAKQ8N1N5 446 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 PPM1KQ8N3J5 372 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 VWCEQ96DN2 955 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 ZFP42Q96MM3 310 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 BAG1Q99933 345 aaPredicted RBP13.44□□□□□ -0.26
IFT88-206ENST00000482172 KCNF1Q9H3M0 494 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 APOBEC3GQ9HC16 384 aaKnown RBP13.44□□□□□ -0.26
IFT88-206ENST00000482172 KANSL3Q9P2N6 904 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 PRKAG2Q9UGJ0 569 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 AGAP1Q9UPQ3 857 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 NUB1Q9Y5A7 615 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 PCDHB7Q9Y5E2 793 aa13.44□□□□□ -0.26
IFT88-206ENST00000482172 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.43□□□□□ -0.26
IFT88-206ENST00000482172 F8VZ95 297 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 P4HA1P13674 534 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 FERP16591 822 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 PAX3P23760 479 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 SOX5P35711 763 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 PRKCIP41743 596 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 CCZ1BP86790 482 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 CCZ1P86791 482 aaPredicted RBP13.43□□□□□ -0.26
IFT88-206ENST00000482172 CUL2Q13617 745 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 SCN5AQ14524 2016 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 NAB2Q15742 525 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 TCTN1Q2MV58 587 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 ZNF667Q5HYK9 610 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 C9orf57Q5W0N0 161 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 WDR59Q6PJI9 974 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 CYP26C1Q6V0L0 522 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 NPAS4Q8IUM7 802 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 RNF169Q8NCN4 708 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 SHC3Q92529 594 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 C18orf25Q96B23 403 aaPredicted RBP13.43□□□□□ -0.26
IFT88-206ENST00000482172 DDX27Q96GQ7 796 aaKnown RBP13.43□□□□□ -0.26
IFT88-206ENST00000482172 HPDLQ96IR7 371 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 ZNF560Q96MR9 790 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 KREMEN1Q96MU8 473 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 HTATIP2Q9BUP3 242 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 GPR88Q9GZN0 384 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 NIF3L1Q9GZT8 377 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 MIOSQ9NXC5 875 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 TUBGCP4Q9UGJ1 667 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 AJAP1Q9UKB5 411 aaPredicted RBP13.43□□□□□ -0.26
IFT88-206ENST00000482172 BZW2Q9Y6E2 419 aaKnown RBP13.43□□□□□ -0.26
IFT88-206ENST00000482172 TRIP11Q15643 1979 aa13.43□□□□□ -0.26
IFT88-206ENST00000482172 ARHGAP6O43182 974 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 BAIAP3O94812 1187 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 SERPING1P05155 500 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 SKILP12757 684 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 KCNJ6P48051 423 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 SCNN1GP51170 649 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 GUCY2FP51841 1108 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 YWHAEP62258 255 aaKnown RBP13.42□□□□□ -0.26
IFT88-206ENST00000482172 SOX4Q06945 474 aaPredicted RBP13.42□□□□□ -0.26
IFT88-206ENST00000482172 ASIC2Q16515 512 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 ARHGAP44Q17R89 818 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 SCARA3Q6AZY7 606 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 SPOPLQ6IQ16 392 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 IRF2BP2Q7Z5L9 587 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 FAM71AQ8IYT1 594 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 TTC39CQ8N584 583 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 URGCPQ8TCY9 931 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 UROC1Q96N76 676 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 BCO2Q9BYV7 579 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 CYP3A43Q9HB55 503 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 IL23AQ9NPF7 189 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 RNF19AQ9NV58 838 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 LRFN2Q9ULH4 789 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 CNTN6Q9UQ52 1028 aa13.42□□□□□ -0.26
IFT88-206ENST00000482172 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.42□□□□□ -0.26
IFT88-206ENST00000482172 SSU72P8A0A1W2PR75 194 aa13.41□□□□□ -0.26
IFT88-206ENST00000482172 FOXN3O00409 490 aaPredicted RBP13.41□□□□□ -0.26
IFT88-206ENST00000482172 FAM163BP0C2L3 166 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms