RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 LRPAP1P30533 357 aa13.53□□□□□ -0.24
SIK3-209ENST00000480222 POLR2BP30876 1174 aaKnown RBP13.53□□□□□ -0.24
SIK3-209ENST00000480222 STAT1P42224 750 aa13.53□□□□□ -0.24
SIK3-209ENST00000480222 APBA1Q02410 837 aa13.53□□□□□ -0.24
SIK3-209ENST00000480222 MYO1EQ12965 1108 aa13.53□□□□□ -0.24
SIK3-209ENST00000480222 SFMBT2Q5VUG0 894 aa13.53□□□□□ -0.24
SIK3-209ENST00000480222 ARHGEF19Q8IW93 802 aa13.53□□□□□ -0.24
SIK3-209ENST00000480222 RNF169Q8NCN4 708 aa13.53□□□□□ -0.24
SIK3-209ENST00000480222 URGCPQ8TCY9 931 aa13.53□□□□□ -0.24
SIK3-209ENST00000480222 LPPQ93052 612 aa13.53□□□□□ -0.24
SIK3-209ENST00000480222 TRIM43Q96BQ3 446 aaPredicted RBP13.53□□□□□ -0.24
SIK3-209ENST00000480222 GAD1Q99259 594 aa13.53□□□□□ -0.24
SIK3-209ENST00000480222 HTATIP2Q9BUP3 242 aa13.53□□□□□ -0.24
SIK3-209ENST00000480222 XYLT2Q9H1B5 865 aa13.53□□□□□ -0.24
SIK3-209ENST00000480222 UBE2TQ9NPD8 197 aaPredicted RBP13.53□□□□□ -0.24
SIK3-209ENST00000480222 KLK14Q9P0G3 267 aa13.53□□□□□ -0.24
SIK3-209ENST00000480222 TUBGCP4Q9UGJ1 667 aa13.53□□□□□ -0.24
SIK3-209ENST00000480222 ABHD14A-ACY1A0A1B0GW23 586 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 MEIS3P2A8K0S8 358 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 RNF225M0QZC1 329 aaPredicted RBP13.52□□□□□ -0.25
SIK3-209ENST00000480222 ARHGAP6O43182 974 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 THP07101 528 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 FERP16591 822 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 SOX5P35711 763 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 KCNJ6P48051 423 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 MYL6P60660 151 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 YWHAEP62258 255 aaKnown RBP13.52□□□□□ -0.25
SIK3-209ENST00000480222 CCZ1BP86790 482 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 CCZ1P86791 482 aaPredicted RBP13.52□□□□□ -0.25
SIK3-209ENST00000480222 LRMPQ12912 555 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 CUL2Q13617 745 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 IKBKEQ14164 716 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 DRAP1Q14919 205 aaPredicted RBP13.52□□□□□ -0.25
SIK3-209ENST00000480222 ASIC2Q16515 512 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 ZNF667Q5HYK9 610 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 HABP4Q5JVS0 413 aaKnown RBP13.52□□□□□ -0.25
SIK3-209ENST00000480222 C9orf57Q5W0N0 161 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 CYP26C1Q6V0L0 522 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 RTN4RL1Q86UN2 441 aaPredicted RBP13.52□□□□□ -0.25
SIK3-209ENST00000480222 NPAS4Q8IUM7 802 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 TMTC1Q8IUR5 882 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 RPUSD2Q8IZ73 545 aaKnown RBP13.52□□□□□ -0.25
SIK3-209ENST00000480222 TTC39CQ8N584 583 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 GSTCDQ8NEC7 633 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 SHC3Q92529 594 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 ZFP42Q96MM3 310 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 PI4K2AQ9BTU6 479 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 KCNF1Q9H3M0 494 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 AIPL1Q9NZN9 384 aa13.52□□□□□ -0.25
SIK3-209ENST00000480222 AJAP1Q9UKB5 411 aaPredicted RBP13.52□□□□□ -0.25
SIK3-209ENST00000480222 TET1Q8NFU7 2136 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 TTC3P53804 2025 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 ANO9A1A5B4 782 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 ENPP3O14638 875 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 BAIAP3O94812 1187 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 CST3P01034 146 aaPredicted RBP13.51□□□□□ -0.25
SIK3-209ENST00000480222 PAX3P23760 479 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 ANXA13P27216 316 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 PRKCIP41743 596 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 SCNN1GP51170 649 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 GOLGA8FQ08AF8 430 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 GOLGA8DPQ0D2H9 430 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 GJB7Q6PEY0 223 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 DEFB128Q7Z7B8 93 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 TMEM139Q8IV31 216 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 C18orf25Q96B23 403 aaPredicted RBP13.51□□□□□ -0.25
SIK3-209ENST00000480222 HPDLQ96IR7 371 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 KREMEN1Q96MU8 473 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 UROC1Q96N76 676 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 MRPL9Q9BYD2 267 aaKnown RBP13.51□□□□□ -0.25
SIK3-209ENST00000480222 GPR88Q9GZN0 384 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 CXCL16Q9H2A7 254 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 APOBEC3GQ9HC16 384 aaKnown RBP13.51□□□□□ -0.25
SIK3-209ENST00000480222 KANSL3Q9P2N6 904 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 LRFN2Q9ULH4 789 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 AGAP1Q9UPQ3 857 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 NUB1Q9Y5A7 615 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 PCDHB7Q9Y5E2 793 aa13.51□□□□□ -0.25
SIK3-209ENST00000480222 BZW2Q9Y6E2 419 aaKnown RBP13.51□□□□□ -0.25
SIK3-209ENST00000480222 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.51□□□□□ -0.25
SIK3-209ENST00000480222 SSU72P8A0A1W2PR75 194 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 PIRO00625 290 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 LRRN2O75325 713 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 OFD1O75665 1012 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 SERPING1P05155 500 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 SKILP12757 684 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 RPL9P32969 192 aaKnown RBP13.5□□□□□ -0.25
SIK3-209ENST00000480222 ASPAP45381 313 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 TAF6P49848 677 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 GUCY2FP51841 1108 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 TNNC1P63316 161 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 PPIGQ13427 754 aaKnown RBP eCLIP13.5□□□□□ -0.259e-10■■□□□ 12.1
SIK3-209ENST00000480222 TUSC3Q13454 348 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 NAB2Q15742 525 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 ARHGAP44Q17R89 818 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 SV2CQ496J9 727 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 NOMO2Q5JPE7 1267 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 E4F1Q66K89 784 aaPredicted RBP13.5□□□□□ -0.25
SIK3-209ENST00000480222 SPOPLQ6IQ16 392 aa13.5□□□□□ -0.25
SIK3-209ENST00000480222 WDR59Q6PJI9 974 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms