RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 CUL2Q13617 745 aa26.18■■□□□ 1.78
SYNGAP1-206ENST00000479510 TDRD10Q5VZ19 366 aaKnown RBP26.18■■□□□ 1.78
SYNGAP1-206ENST00000479510 MIS18BP1Q6P0N0 1132 aa26.18■■□□□ 1.78
SYNGAP1-206ENST00000479510 ZNF365Q70YC5 407 aa26.18■■□□□ 1.78
SYNGAP1-206ENST00000479510 DYDC1Q8WWB3 177 aa26.18■■□□□ 1.78
SYNGAP1-206ENST00000479510 HAUS2Q9NVX0 235 aa26.18■■□□□ 1.78
SYNGAP1-206ENST00000479510 AGO2Q9UKV8 859 aaKnown RBP26.18■■□□□ 1.78
SYNGAP1-206ENST00000479510 FER1L6Q2WGJ9 1857 aa26.17■■□□□ 1.78
SYNGAP1-206ENST00000479510 CFAP73A6NFT4 308 aa26.17■■□□□ 1.78
SYNGAP1-206ENST00000479510 ABHD2P08910 425 aa26.17■■□□□ 1.78
SYNGAP1-206ENST00000479510 RALAP11233 206 aa26.17■■□□□ 1.78
SYNGAP1-206ENST00000479510 NOMO3P69849 1222 aa26.17■■□□□ 1.78
SYNGAP1-206ENST00000479510 STAT4Q14765 748 aa26.17■■□□□ 1.78
SYNGAP1-206ENST00000479510 VSTM1Q6UX27 236 aa26.17■■□□□ 1.78
SYNGAP1-206ENST00000479510 RIBC1Q8N443 379 aaPredicted RBP26.17■■□□□ 1.78
SYNGAP1-206ENST00000479510 ATG4CQ96DT6 458 aa26.17■■□□□ 1.78
SYNGAP1-206ENST00000479510 HERPUD2Q9BSE4 406 aa26.17■■□□□ 1.78
SYNGAP1-206ENST00000479510 OSBPL8Q9BZF1 889 aa26.17■■□□□ 1.78
SYNGAP1-206ENST00000479510 NINJ2Q9NZG7 142 aa26.17■■□□□ 1.78
SYNGAP1-206ENST00000479510 ADAM22Q9P0K1 906 aa26.17■■□□□ 1.78
SYNGAP1-206ENST00000479510 TNS1Q9HBL0 1735 aaKnown RBP26.17■■□□□ 1.78
SYNGAP1-206ENST00000479510 MAMLD1Q13495 774 aa26.16■■□□□ 1.78
SYNGAP1-206ENST00000479510 GBP7Q8N8V2 638 aaPredicted RBP26.16■■□□□ 1.78
SYNGAP1-206ENST00000479510 REPS2Q8NFH8 660 aa26.16■■□□□ 1.78
SYNGAP1-206ENST00000479510 STK32BQ9NY57 414 aa26.16■■□□□ 1.78
SYNGAP1-206ENST00000479510 MGRN1O60291 552 aa26.16■■□□□ 1.78
SYNGAP1-206ENST00000479510 CDH16O75309 829 aa26.16■■□□□ 1.78
SYNGAP1-206ENST00000479510 ACTR2P61160 394 aa26.16■■□□□ 1.78
SYNGAP1-206ENST00000479510 KYNUQ16719 465 aa26.16■■□□□ 1.78
SYNGAP1-206ENST00000479510 CCDC38Q502W7 563 aa26.16■■□□□ 1.78
SYNGAP1-206ENST00000479510 CKAP2Q8WWK9 683 aa26.16■■□□□ 1.78
SYNGAP1-206ENST00000479510 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.16■■□□□ 1.78
SYNGAP1-206ENST00000479510 R3HDM2Q9Y2K5 976 aaKnown RBP26.16■■□□□ 1.78
SYNGAP1-206ENST00000479510 USP15Q9Y4E8 981 aaPredicted RBP26.16■■□□□ 1.78
SYNGAP1-206ENST00000479510 PARP14Q460N5 1801 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 RDXP35241 583 aaKnown RBP26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 IFNAR2P48551 515 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 ZNF280AP59817 542 aaPredicted RBP26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 EMC2Q15006 297 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 GNPTABQ3T906 1256 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 CIAPIN1Q6FI81 312 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 DRICH1Q6PGQ1 229 aaPredicted RBP26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 RPAINQ86UA6 219 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 CCDC60Q8IWA6 550 aaPredicted RBP26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 PARVAQ9NVD7 372 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 ADAMTS5Q9UNA0 930 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 RIPK3Q9Y572 518 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 SPATA31C2B4DYI2 1134 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 O00370 1275 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 NDC80O14777 642 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 RGS20O76081 388 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 SUN1O94901 812 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 VNN1O95497 513 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 FAM212AQ96EL1 285 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 CGRRF1Q99675 332 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 IP6K2Q9UHH9 426 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 PCDHB4Q9Y5E5 795 aa26.15■■□□□ 1.78
SYNGAP1-206ENST00000479510 ATP2A1O14983 1001 aa26.14■■□□□ 1.77
SYNGAP1-206ENST00000479510 CLTAP09496 248 aa26.14■■□□□ 1.77
SYNGAP1-206ENST00000479510 SUPT20HL2P0C7V6 817 aa26.14■■□□□ 1.77
SYNGAP1-206ENST00000479510 GNA15P30679 374 aa26.14■■□□□ 1.77
SYNGAP1-206ENST00000479510 NAMPTP43490 491 aa26.14■■□□□ 1.77
SYNGAP1-206ENST00000479510 BACE1P56817 501 aa26.14■■□□□ 1.77
SYNGAP1-206ENST00000479510 DGKZQ13574 1117 aa26.14■■□□□ 1.77
SYNGAP1-206ENST00000479510 SUPT20HL1Q3ZLR7 823 aa26.14■■□□□ 1.77
SYNGAP1-206ENST00000479510 RCOR2Q8IZ40 523 aa26.14■■□□□ 1.77
SYNGAP1-206ENST00000479510 AS3MTQ9HBK9 375 aa26.14■■□□□ 1.77
SYNGAP1-206ENST00000479510 CALCAP01258 141 aa26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 KLRC2P26717 231 aa26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 DSG3P32926 999 aa26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 NLRP11P59045 1033 aaKnown RBP26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 NR1H3Q13133 447 aa26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 LRRC38Q5VT99 294 aa26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 ZNF772Q68DY9 489 aaPredicted RBP26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 HIBCHQ6NVY1 386 aaPredicted RBP26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 ARHGEF18Q6ZSZ5 1173 aa26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 ZCCHC9Q8N567 271 aaKnown RBP26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 FEZF2Q8TBJ5 459 aa26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 ZKSCAN4Q969J2 545 aaPredicted RBP26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 ELMO3Q96BJ8 720 aa26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 RBM41Q96IZ5 413 aaKnown RBP26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 C11orf70Q9BRQ4 267 aa26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 MTFR1LQ9H019 292 aa26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 PORCNQ9H237 461 aa26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 AP3M2P53677 418 aa26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 POLGP54098 1239 aaPredicted RBP26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 TAS2R40P59535 323 aa26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 LLGL1Q15334 1064 aa26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 CRELD2Q6UXH1 353 aaPredicted RBP26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 C12orf42Q96LP6 360 aa26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 RBAKQ9NYW8 714 aaPredicted RBP26.13■■□□□ 1.77
SYNGAP1-206ENST00000479510 BRAFP15056 766 aa26.12■■□□□ 1.77
SYNGAP1-206ENST00000479510 SLC8A1P32418 973 aa26.12■■□□□ 1.77
SYNGAP1-206ENST00000479510 MCL1Q07820 350 aa26.12■■□□□ 1.77
SYNGAP1-206ENST00000479510 TRIP13Q15645 432 aaPredicted RBP26.12■■□□□ 1.77
SYNGAP1-206ENST00000479510 IZUMO3Q5VZ72 239 aa26.12■■□□□ 1.77
SYNGAP1-206ENST00000479510 SNRNP48Q6IEG0 339 aaKnown RBP26.12■■□□□ 1.77
SYNGAP1-206ENST00000479510 PPP1R21Q6ZMI0 780 aa26.12■■□□□ 1.77
SYNGAP1-206ENST00000479510 RBBP8NLQ8NC74 664 aaPredicted RBP26.12■■□□□ 1.77
SYNGAP1-206ENST00000479510 APOBEC3GQ9HC16 384 aaKnown RBP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms