RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 TUBB6Q9BUF5 446 aa13.98□□□□□ -0.17
CNKSR3-204ENST00000479339 PITPNM3Q9BZ71 974 aa13.98□□□□□ -0.17
CNKSR3-204ENST00000479339 TRIM31Q9BZY9 425 aa13.98□□□□□ -0.17
CNKSR3-204ENST00000479339 RNF208Q9H0X6 261 aa13.98□□□□□ -0.17
CNKSR3-204ENST00000479339 KANSL2Q9H9L4 492 aa13.98□□□□□ -0.17
CNKSR3-204ENST00000479339 NKIRAS1Q9NYS0 192 aa13.98□□□□□ -0.17
CNKSR3-204ENST00000479339 SH3GLB1Q9Y371 365 aa13.98□□□□□ -0.17
CNKSR3-204ENST00000479339 UMODL1Q5DID0 1318 aa13.98□□□□□ -0.17
CNKSR3-204ENST00000479339 TNRC18O15417 2968 aaPredicted RBP13.98□□□□□ -0.17
CNKSR3-204ENST00000479339 CALML3P27482 149 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 CCNA1P78396 465 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 MAPK7Q13164 816 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 RCN1Q15293 331 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 PHLDB3Q6NSJ2 640 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 JAMLQ86YT9 394 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 CLEC10AQ8IUN9 316 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 SRBD1Q8N5C6 995 aaKnown RBP13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 FBXO25Q8TCJ0 367 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 NAT14Q8WUY8 206 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 GFM2Q969S9 779 aaKnown RBP13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 EEF2KMTQ96G04 330 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 NUDT12Q9BQG2 462 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 YIPF2Q9BWQ6 316 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 SPZ1Q9BXG8 430 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 NACAP1Q9BZK3 213 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 PORCNQ9H237 461 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 RANBP17Q9H2T7 1088 aaKnown RBP13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 SYNCQ9H7C4 482 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 ADAMTS1Q9UHI8 967 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 ACTL7BQ9Y614 415 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 MINDY4BA8MYZ0 360 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 MAGEB2O15479 319 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 RAD21O60216 631 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 PRDM1O75626 825 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 NOL4O94818 638 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 HMGCRP04035 888 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 XRCC5P13010 732 aaKnown RBP13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 RNASELQ05823 741 aaKnown RBP13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 RAPGEF1Q13905 1077 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 COG2Q14746 738 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 CCDC92Q53HC0 331 aaPredicted RBP13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 MORN1Q5T089 497 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 SEPT14Q6ZU15 432 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 HS2ST1Q7LGA3 356 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 GPR142Q7Z601 462 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 PLEKHH3Q7Z736 793 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 NT5DC3Q86UY8 548 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 KIAA0895Q8NCT3 520 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 SEMA4AQ9H3S1 761 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 RIC8AQ9NPQ8 531 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 RHBDL2Q9NX52 303 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 HOXC10Q9NYD6 342 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 PTTG2Q9NZH5 202 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 BTBD7Q9P203 1132 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 TUBGCP4Q9UGJ1 667 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 ANGPTL2Q9UKU9 493 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 AMFRQ9UKV5 643 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 CHKBQ9Y259 395 aa13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 V9GY48 417 aaPredicted RBP13.97□□□□□ -0.17
CNKSR3-204ENST00000479339 KIAA0100Q14667 2235 aaKnown RBP13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 ADGRA3Q8IWK6 1321 aa13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 ZNF189O75820 626 aaPredicted RBP13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 FGGP02679 453 aa13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 EEF2P13639 858 aaKnown RBP13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 POLR2FP61218 127 aaKnown RBP13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 HPCAP84074 193 aa13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 IL9RQ01113 521 aa13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 CDR2Q01850 454 aa13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 SEC23AQ15436 765 aa13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 LRRC55Q6ZSA7 311 aa13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 CATIPQ7Z7H3 387 aa13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 CTNNBL1Q8WYA6 563 aaPredicted RBP13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 STMN2Q93045 179 aa13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 TSPAN18Q96SJ8 248 aa13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 MPHOSPH6Q99547 160 aaKnown RBP13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 LSM14BQ9BX40 385 aaKnown RBP13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 TANGO6Q9C0B7 1094 aa13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 TMEM60Q9H2L4 133 aa13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 PAK6Q9NQU5 681 aaPredicted RBP13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 GRHL1Q9NZI5 618 aa13.96□□□□□ -0.17
CNKSR3-204ENST00000479339 PLXNB2O15031 1838 aa13.96□□□□□ -0.18
CNKSR3-204ENST00000479339 PVALEFA0A1B0GWK0 134 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 CAPN9O14815 690 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 WDR46O15213 610 aaKnown RBP13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 NKRFO15226 690 aaKnown RBP eCLIP13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 BIRC5O15392 142 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 HNRNPRO43390 633 aaKnown RBP13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 ZWINTO95229 277 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 PSMG1O95456 288 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 CYP1A1P04798 512 aaPredicted RBP13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 ZNF24P17028 368 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 CHRNA3P32297 505 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 RGS2P41220 211 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 SLCO1A2P46721 670 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 SESN3P58005 492 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 RTP1P59025 263 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 KHDC1Q4VXA5 237 aaKnown RBP13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 RGS9BPQ6ZS82 235 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 UBE2Q1Q7Z7E8 422 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 SPATA24Q86W54 205 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms