RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 ATRNL1Q5VV63 1379 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 TMEM2Q9UHN6 1383 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 SYN1P17600 705 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 RHCEP18577 417 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 HNRNPMP52272 730 aaKnown RBP eCLIP6.24□□□□□ -1.41
RFC4-212ENST00000479307 CACNB3P54284 484 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 FAM193AP78312 1265 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 RHDQ02161 417 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 HDAC1Q13547 482 aaPredicted RBP6.24□□□□□ -1.41
RFC4-212ENST00000479307 GALEQ14376 348 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 MAP9Q49MG5 647 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 KHDC1Q4VXA5 237 aaKnown RBP6.24□□□□□ -1.41
RFC4-212ENST00000479307 MFSD5Q6N075 450 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 NPNTQ6UXI9 565 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 ZGPATQ8N5A5 531 aaKnown RBP6.24□□□□□ -1.41
RFC4-212ENST00000479307 REPS2Q8NFH8 660 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 PJA1Q8NG27 643 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 KCNC2Q96PR1 638 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 LRFN3Q9BTN0 628 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 B3GNT5Q9BYG0 378 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 ZNF700Q9H0M5 742 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 MEGF9Q9H1U4 602 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 L1RE1Q9UN81 338 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 CEP152O94986 1710 aa6.24□□□□□ -1.41
RFC4-212ENST00000479307 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.24□□□□□ -1.41
RFC4-212ENST00000479307 MBD5Q9P267 1494 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 BRWD3Q6RI45 1802 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 PNPLA6Q8IY17 1366 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 A0A088AWK7 358 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 CAPN8A6NHC0 703 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 A6NNZ2 444 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 B5MCH6 92 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 PJA2O43164 708 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 ZSCAN22P10073 491 aaPredicted RBP6.23□□□□□ -1.41
RFC4-212ENST00000479307 MYBP10242 640 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 PCSK1P29120 753 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 GPSM2P81274 684 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 SAFBQ15424 915 aaKnown RBP eCLIP6.23□□□□□ -1.41
RFC4-212ENST00000479307 OTUD7BQ6GQQ9 843 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 PPP4R4Q6NUP7 873 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 FAM111BQ6SJ93 734 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 CCDC149Q6ZUS6 474 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 HEATR3Q7Z4Q2 680 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 FRMD5Q7Z6J6 570 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 C11orf96Q7Z7L8 435 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 PLXDC1Q8IUK5 500 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 GPR135Q8IZ08 494 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 SYT8Q8NBV8 401 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 LRRC37BQ96QE4 947 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 WDCPQ9H6R7 721 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 LDAHQ9H6V9 325 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 LMBRD1Q9NUN5 540 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 SLC52A1Q9NWF4 448 aa6.23□□□□□ -1.41
RFC4-212ENST00000479307 FEZ2Q9UHY8 353 aaPredicted RBP6.23□□□□□ -1.41
RFC4-212ENST00000479307 EIF2AK4Q9P2K8 1649 aaKnown RBP6.23□□□□□ -1.41
RFC4-212ENST00000479307 ARHGAP35Q9NRY4 1499 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 MARF1Q9Y4F3 1742 aaKnown RBP6.22□□□□□ -1.41
RFC4-212ENST00000479307 LAMC1P11047 1609 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 EFCAB6Q5THR3 1501 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 ANO9A1A5B4 782 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 HOXA3O43365 443 aaPredicted RBP6.22□□□□□ -1.41
RFC4-212ENST00000479307 MAP4K4O95819 1239 aaPredicted RBP6.22□□□□□ -1.41
RFC4-212ENST00000479307 SNRPA1P09661 255 aaKnown RBP6.22□□□□□ -1.41
RFC4-212ENST00000479307 NBPF7P0C2Y1 421 aaPredicted RBP6.22□□□□□ -1.41
RFC4-212ENST00000479307 MALP21145 153 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 FPR1P21462 350 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 RAB1AP62820 205 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 NKX6-1P78426 367 aaPredicted RBP6.22□□□□□ -1.41
RFC4-212ENST00000479307 DUSP8Q13202 625 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 MFSD14BQ5SR56 506 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 DACT2Q5SW24 774 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 ZFYVE27Q5T4F4 411 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 AFMIDQ63HM1 303 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 DARS2Q6PI48 645 aaKnown RBP6.22□□□□□ -1.41
RFC4-212ENST00000479307 DOK3Q7L591 496 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 FAM156AQ8NDB6 213 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 RAB24Q969Q5 203 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 SLC35A4Q96G79 324 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 VRK1Q99986 396 aaPredicted RBP6.22□□□□□ -1.41
RFC4-212ENST00000479307 PLA2G12BQ9BX93 195 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 KCNH6Q9H252 994 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 AGO3Q9H9G7 860 aaKnown RBP6.22□□□□□ -1.41
RFC4-212ENST00000479307 GNL3LQ9NVN8 582 aaKnown RBP6.22□□□□□ -1.41
RFC4-212ENST00000479307 PNPOQ9NVS9 261 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 SIDT1Q9NXL6 827 aaKnown RBP6.22□□□□□ -1.41
RFC4-212ENST00000479307 TRPC5Q9UL62 973 aaPredicted RBP6.22□□□□□ -1.41
RFC4-212ENST00000479307 CLCA2Q9UQC9 943 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 ACTL7AQ9Y615 435 aa6.22□□□□□ -1.41
RFC4-212ENST00000479307 CFAP65Q6ZU64 1925 aaKnown RBP6.21□□□□□ -1.41
RFC4-212ENST00000479307 LRRC14BA6NHZ5 514 aa6.21□□□□□ -1.42
RFC4-212ENST00000479307 GOLIM4O00461 696 aa6.21□□□□□ -1.42
RFC4-212ENST00000479307 INHBBP09529 407 aa6.21□□□□□ -1.42
RFC4-212ENST00000479307 RAP2AP10114 183 aa6.21□□□□□ -1.42
RFC4-212ENST00000479307 TYRP14679 529 aa6.21□□□□□ -1.42
RFC4-212ENST00000479307 BMP7P18075 431 aa6.21□□□□□ -1.42
RFC4-212ENST00000479307 ATP5JP18859 108 aa6.21□□□□□ -1.42
RFC4-212ENST00000479307 SMARCA1P28370 1054 aa6.21□□□□□ -1.42
RFC4-212ENST00000479307 CNR2P34972 360 aa6.21□□□□□ -1.42
RFC4-212ENST00000479307 ALDH1A3P47895 512 aa6.21□□□□□ -1.42
RFC4-212ENST00000479307 CREMQ03060 361 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms