RNA–Protein interactions for RNA: ENST00000479261.1

DEPDC5-217, Transcript of DEP domain containing 5, humanhuman

TSL 2

Gene DEPDC5, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-217ENST00000479261 BARX2Q9UMQ3 279 aaPredicted RBP13.39□□□□□ -0.27
DEPDC5-217ENST00000479261 SF3B1O75533 1304 aaKnown RBP eCLIP13.39□□□□□ -0.27
DEPDC5-217ENST00000479261 PLXNA3P51805 1871 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 I3L4J1 428 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 MBTPS2O43462 519 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 PRPF40AO75400 957 aaKnown RBP13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 IL18RAPO95256 599 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 TKTP29401 623 aaKnown RBP13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 PRCPP42785 496 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 UBE2HP62256 183 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 MYBPC2Q14324 1141 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 SKIV2LQ15477 1246 aaKnown RBP13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 C1orf220Q5T0J3 134 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 ANKRD54Q6NXT1 300 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 PRSS55Q6UWB4 352 aaPredicted RBP13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 LIMS2Q7Z4I7 341 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 C1orf127Q8N9H9 656 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 OR5B17Q8NGF7 314 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 KIAA1586Q9HCI6 787 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 EXOC1Q9NV70 894 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 SSX2IPQ9Y2D8 614 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 BACE2Q9Y5Z0 518 aa13.38□□□□□ -0.27
DEPDC5-217ENST00000479261 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 GOLGA6L4A6NEF3 574 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 ZNF233A6NK53 670 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 C2CD2LO14523 706 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 OAZ2O95190 189 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 CST3P01034 146 aaPredicted RBP13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 RPL17P18621 184 aaKnown RBP13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 CASP4P49662 377 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 PMS1P54277 932 aaKnown RBP13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 ELAVL2Q12926 359 aaKnown RBP13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 TMEM132DQ14C87 1099 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 TJAP1Q5JTD0 557 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 ZNF658Q5TYW1 1059 aaPredicted RBP13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 CENPPQ6IPU0 288 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 SLC8B1Q6J4K2 584 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 ZC3H3Q8IXZ2 948 aaKnown RBP13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 XXYLT1Q8NBI6 393 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 RIN2Q8WYP3 895 aaPredicted RBP13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 PPP2R3CQ969Q6 453 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 POP1Q99575 1024 aaKnown RBP13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 CD320Q9NPF0 282 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 DPP3Q9NY33 737 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 RBAKQ9NYW8 714 aaPredicted RBP13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 MTRRQ9UBK8 725 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 MAPK8IP1Q9UQF2 711 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 DOCK6Q96HP0 2047 aa13.37□□□□□ -0.27
DEPDC5-217ENST00000479261 FSD2A1L4K1 749 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 SYN3O14994 580 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 TGM5O43548 720 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 ABLIM3O94929 683 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 CYP11A1P05108 521 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 IL9P15248 144 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 CD44P16070 742 aaKnown RBP13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 CYP24A1Q07973 514 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 RAB33AQ14088 237 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 PSMD6Q15008 389 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 SMAD2Q15796 467 aaKnown RBP13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 SNRNP35Q16560 246 aaKnown RBP13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 SMYD4Q8IYR2 804 aaPredicted RBP13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 ADSSL1Q8N142 457 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 RDH13Q8NBN7 331 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 BEST2Q8NFU1 509 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 PARD3BQ8TEW8 1205 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 RTP3Q9BQQ7 232 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 COL25A1Q9BXS0 654 aaPredicted RBP13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 INTS13Q9NVM9 706 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 MAN1B1Q9UKM7 699 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 PCDHB8Q9UN66 801 aa13.36□□□□□ -0.27
DEPDC5-217ENST00000479261 NCOR1O75376 2440 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 C19orf67A6NJJ6 358 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 PPP1R3GB7ZBB8 358 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 TRAPPC3O43617 180 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 VNN2O95498 520 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 URODP06132 367 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 HOXB8P17481 243 aaPredicted RBP13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 KLRC2P26717 231 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 MORC3Q14149 939 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 BMS1Q14692 1282 aaKnown RBP13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 AAK1Q2M2I8 961 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 VARS2Q5ST30 1063 aaKnown RBP13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 PTCRAQ6ISU1 281 aaPredicted RBP13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 C15orf39Q6ZRI6 1047 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 PPFIBP1Q86W92 1011 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 CEP57Q86XR8 500 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 C12orf76Q8N812 135 aaPredicted RBP13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 HDAC7Q8WUI4 952 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 SENP8Q96LD8 212 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 MED15Q96RN5 788 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 EMILIN2Q9BXX0 1053 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 RHOBTB2Q9BYZ6 727 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 ADAM7Q9H2U9 754 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 CD207Q9UJ71 328 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 CDH22Q9UJ99 828 aa13.35□□□□□ -0.27
DEPDC5-217ENST00000479261 TTC28Q96AY4 2481 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms