RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 COL11A1P12107 1806 aaPredicted RBP11.51□□□□□ -0.57
VPS52-217ENST00000478934 RASGRF2O14827 1237 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 HSPA6P17066 643 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 MARK3P27448 753 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 GTF2H1P32780 548 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 MMP13P45452 471 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 SCTRP47872 440 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 MAMLD1Q13495 774 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 CUL2Q13617 745 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 PSMD6Q15008 389 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 FAM133BQ5BKY9 247 aaKnown RBP11.51□□□□□ -0.57
VPS52-217ENST00000478934 XKR3Q5GH77 459 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 TREML2Q5T2D2 321 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 TXNRD3NBQ6F5E7 133 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 MIS18BP1Q6P0N0 1132 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 CATSPERGQ6ZRH7 1159 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 YTHDF3Q7Z739 585 aaKnown RBP11.51□□□□□ -0.57
VPS52-217ENST00000478934 SPATS2Q86XZ4 545 aaKnown RBP11.51□□□□□ -0.57
VPS52-217ENST00000478934 ANKRD42Q8N9B4 389 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 SLC17A8Q8NDX2 589 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 HVCN1Q96D96 273 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 TEX13BQ9BXU2 312 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 ADAM33Q9BZ11 813 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 ACAD9Q9H845 621 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 ADAM22Q9P0K1 906 aa11.51□□□□□ -0.57
VPS52-217ENST00000478934 THAP12O43422 761 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 GGPS1O95749 300 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 CYP1A1P04798 512 aaPredicted RBP11.5□□□□□ -0.57
VPS52-217ENST00000478934 GJB1P08034 283 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 ZSCAN5DPP0CG00 497 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 CETPP11597 493 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 RARGP13631 454 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 ETS1P14921 441 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 GNA15P30679 374 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 STRN3Q13033 797 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 CALCOCO2Q13137 446 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 TMEM63BQ5T3F8 832 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 EXOC3L1Q86VI1 746 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 TRIM50Q86XT4 487 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 SUGP1Q8IWZ8 645 aaKnown RBP11.5□□□□□ -0.57
VPS52-217ENST00000478934 CYP4X1Q8N118 509 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 GDAP1Q8TB36 358 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 DEPTORQ8TB45 409 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 PGM2Q96G03 612 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 ZNF317Q96PQ6 595 aaPredicted RBP11.5□□□□□ -0.57
VPS52-217ENST00000478934 DCLK3Q9C098 648 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 ADAMTS5Q9UNA0 930 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 ATXN2Q99700 1313 aaKnown RBP11.5□□□□□ -0.57
VPS52-217ENST00000478934 ITGBL1O95965 494 aaPredicted RBP11.5□□□□□ -0.57
VPS52-217ENST00000478934 GH1P01241 217 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 OATP04181 439 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 PAEPP09466 180 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 ADCY8P40145 1251 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 OSTNP61366 133 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 ANKRD35Q8N283 1001 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 GPATCH11Q8N954 259 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 C12orf50Q8NA57 414 aaPredicted RBP11.5□□□□□ -0.57
VPS52-217ENST00000478934 RBBP8NLQ8NC74 664 aaPredicted RBP11.5□□□□□ -0.57
VPS52-217ENST00000478934 RDM1Q8NG50 284 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 MORC4Q8TE76 937 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 HAUS1Q96CS2 278 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 SCLT1Q96NL6 688 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 PORCNQ9H237 461 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 C17orf75Q9HAS0 396 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 AFG3L2Q9Y4W6 797 aa11.5□□□□□ -0.57
VPS52-217ENST00000478934 CNTNAP2Q9UHC6 1331 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 TLR3O15455 904 aaKnown RBP11.49□□□□□ -0.57
VPS52-217ENST00000478934 MAFGO15525 162 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 SRGAP2CP0DJJ0 459 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 FDX1P10109 184 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 NOMO3P69849 1222 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 CLDN10P78369 228 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 CENPCQ03188 943 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 MPP2Q14168 576 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 ZKSCAN8Q15776 578 aaPredicted RBP11.49□□□□□ -0.57
VPS52-217ENST00000478934 ABRAQ8N0Z2 381 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 CCT6BQ92526 530 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 C9orf72Q96LT7 481 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 CEP89Q96ST8 783 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 C10orf88Q9H8K7 445 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 ZNF112Q9UJU3 913 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 MAFBQ9Y5Q3 323 aaPredicted RBP11.49□□□□□ -0.57
VPS52-217ENST00000478934 RLFQ13129 1914 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 GSTTP1A0A1W2PQM5 241 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 C5orf60A6NFR6 353 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 RASSF9O75901 435 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 PROSCO94903 275 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 WEE2P0C1S8 567 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 UBA1P22314 1058 aaKnown RBP11.49□□□□□ -0.57
VPS52-217ENST00000478934 BRD2P25440 801 aaKnown RBP11.49□□□□□ -0.57
VPS52-217ENST00000478934 ARL2P36404 184 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 HIRAP54198 1017 aaPredicted RBP11.49□□□□□ -0.57
VPS52-217ENST00000478934 NOP14P78316 857 aaKnown RBP11.49□□□□□ -0.57
VPS52-217ENST00000478934 PTP4A2Q12974 167 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 ORC1Q13415 861 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 CAPSQ13938 189 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 E2F5Q15329 346 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 LY6KQ17RY6 165 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 ZNF568Q3ZCX4 644 aa11.49□□□□□ -0.57
VPS52-217ENST00000478934 ZFYVE27Q5T4F4 411 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms