RNA–Protein interactions for RNA: ENST00000478901.1

CDK11A-215, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-215ENST00000478901 DUSP6Q16828 381 aa18.66■□□□□ 0.58
CDK11A-215ENST00000478901 RTP2Q5QGT7 225 aa18.66■□□□□ 0.58
CDK11A-215ENST00000478901 KLHL10Q6JEL2 608 aa18.66■□□□□ 0.58
CDK11A-215ENST00000478901 C1orf127Q8N9H9 656 aa18.66■□□□□ 0.58
CDK11A-215ENST00000478901 CXorf38Q8TB03 319 aa18.66■□□□□ 0.58
CDK11A-215ENST00000478901 PARD3BQ8TEW8 1205 aa18.66■□□□□ 0.58
CDK11A-215ENST00000478901 CCDC127Q96BQ5 260 aa18.66■□□□□ 0.58
CDK11A-215ENST00000478901 EEF2KMTQ96G04 330 aa18.66■□□□□ 0.58
CDK11A-215ENST00000478901 CGRRF1Q99675 332 aa18.66■□□□□ 0.58
CDK11A-215ENST00000478901 MTMR12Q9C0I1 747 aa18.66■□□□□ 0.58
CDK11A-215ENST00000478901 IGFLR1Q9H665 355 aa18.66■□□□□ 0.58
CDK11A-215ENST00000478901 TLE6Q9H808 572 aa18.66■□□□□ 0.58
CDK11A-215ENST00000478901 MRPL17Q9NRX2 175 aaKnown RBP18.66■□□□□ 0.58
CDK11A-215ENST00000478901 FRMD4BQ9Y2L6 1034 aa18.66■□□□□ 0.58
CDK11A-215ENST00000478901 NUB1Q9Y5A7 615 aa18.66■□□□□ 0.58
CDK11A-215ENST00000478901 BRWD1Q9NSI6 2320 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 MAPK13O15264 365 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 TRAPPC3O43617 180 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 TMEM191BP0C7N4 346 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 FGFR3P22607 806 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 LRRC63Q05C16 580 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 DUOXA2Q1HG44 320 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 KIAA1841Q6NSI8 718 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.65■□□□□ 0.58
CDK11A-215ENST00000478901 CEP57Q86XR8 500 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 WDR49Q8IV35 697 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 ZC3H3Q8IXZ2 948 aaKnown RBP18.65■□□□□ 0.58
CDK11A-215ENST00000478901 NELFBQ8WX92 580 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 RIN2Q8WYP3 895 aaPredicted RBP18.65■□□□□ 0.58
CDK11A-215ENST00000478901 ZNF516Q92618 1163 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 PPP2R3CQ969Q6 453 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 SUSD3Q96L08 255 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 FNBP1Q96RU3 617 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 TSG101Q99816 390 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 TTPALQ9BTX7 342 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 PRDM6Q9NQX0 595 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 SSX2IPQ9Y2D8 614 aa18.65■□□□□ 0.58
CDK11A-215ENST00000478901 SPTLC1O15269 473 aa18.64■□□□□ 0.57
CDK11A-215ENST00000478901 ITGB3P05106 788 aa18.64■□□□□ 0.57
CDK11A-215ENST00000478901 CNPP09543 421 aaKnown RBP18.64■□□□□ 0.57
CDK11A-215ENST00000478901 TNNI1P19237 187 aa18.64■□□□□ 0.57
CDK11A-215ENST00000478901 TKTP29401 623 aaKnown RBP18.64■□□□□ 0.57
CDK11A-215ENST00000478901 POLR2BP30876 1174 aaKnown RBP18.64■□□□□ 0.57
CDK11A-215ENST00000478901 AARSP49588 968 aaKnown RBP eCLIP18.64■□□□□ 0.57
CDK11A-215ENST00000478901 LILRA4P59901 499 aa18.64■□□□□ 0.57
CDK11A-215ENST00000478901 COL19A1Q14993 1142 aa18.64■□□□□ 0.57
CDK11A-215ENST00000478901 SKIV2LQ15477 1246 aaKnown RBP18.64■□□□□ 0.57
CDK11A-215ENST00000478901 TTI2Q6NXR4 508 aa18.64■□□□□ 0.57
CDK11A-215ENST00000478901 PRSS55Q6UWB4 352 aaPredicted RBP18.64■□□□□ 0.57
CDK11A-215ENST00000478901 GPR65Q8IYL9 337 aa18.64■□□□□ 0.57
CDK11A-215ENST00000478901 LNX1Q8TBB1 728 aaPredicted RBP18.64■□□□□ 0.57
CDK11A-215ENST00000478901 PIK3R5Q8WYR1 880 aa18.64■□□□□ 0.57
CDK11A-215ENST00000478901 ANKRD36BP1Q96IX9 119 aa18.64■□□□□ 0.57
CDK11A-215ENST00000478901 KLHL5Q96PQ7 755 aa18.64■□□□□ 0.57
CDK11A-215ENST00000478901 DUSP9Q99956 384 aaKnown RBP18.64■□□□□ 0.57
CDK11A-215ENST00000478901 RXFP1Q9HBX9 757 aa18.64■□□□□ 0.57
CDK11A-215ENST00000478901 SIX4Q9UIU6 781 aa18.64■□□□□ 0.57
CDK11A-215ENST00000478901 AGAP1Q9UPQ3 857 aa18.64■□□□□ 0.57
CDK11A-215ENST00000478901 XIRP2A4UGR9 3374 aa18.64■□□□□ 0.57
CDK11A-215ENST00000478901 LRRIQ3A6PVS8 624 aaPredicted RBP18.63■□□□□ 0.57
CDK11A-215ENST00000478901 M0QZQ0 153 aa18.63■□□□□ 0.57
CDK11A-215ENST00000478901 CETN3O15182 167 aa18.63■□□□□ 0.57
CDK11A-215ENST00000478901 LINC01565O15544 149 aa18.63■□□□□ 0.57
CDK11A-215ENST00000478901 CLASP2O75122 1294 aaKnown RBP18.63■□□□□ 0.57
CDK11A-215ENST00000478901 TNNC2P02585 160 aa18.63■□□□□ 0.57
CDK11A-215ENST00000478901 PSMC2P35998 433 aaKnown RBP18.63■□□□□ 0.57
CDK11A-215ENST00000478901 DLG4P78352 724 aa18.63■□□□□ 0.57
CDK11A-215ENST00000478901 CLDN10P78369 228 aa18.63■□□□□ 0.57
CDK11A-215ENST00000478901 FKBP3Q00688 224 aaKnown RBP18.63■□□□□ 0.57
CDK11A-215ENST00000478901 ADAM15Q13444 863 aa18.63■□□□□ 0.57
CDK11A-215ENST00000478901 CTC1Q2NKJ3 1217 aa18.63■□□□□ 0.57
CDK11A-215ENST00000478901 RBM43Q6ZSC3 357 aaKnown RBP18.63■□□□□ 0.57
CDK11A-215ENST00000478901 FAM186BQ8IYM0 893 aa18.63■□□□□ 0.57
CDK11A-215ENST00000478901 CSGALNACT2Q8N6G5 542 aa18.63■□□□□ 0.57
CDK11A-215ENST00000478901 EFHBQ8N7U6 833 aa18.63■□□□□ 0.57
CDK11A-215ENST00000478901 TMC2Q8TDI7 906 aa18.63■□□□□ 0.57
CDK11A-215ENST00000478901 CDCA3Q99618 268 aaPredicted RBP18.63■□□□□ 0.57
CDK11A-215ENST00000478901 ITGA11Q9UKX5 1188 aa18.63■□□□□ 0.57
CDK11A-215ENST00000478901 CTNND2Q9UQB3 1225 aa18.63■□□□□ 0.57
CDK11A-215ENST00000478901 SYN3O14994 580 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 GLP2RO95838 553 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 TAF6P49848 677 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 STX17P56962 302 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 RBM10P98175 930 aaKnown RBP18.62■□□□□ 0.57
CDK11A-215ENST00000478901 PAK1Q13153 545 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 KCNC3Q14003 757 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 C1orf220Q5T0J3 134 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 FOXR2Q6PJQ5 311 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 TRAPPC11Q7Z392 1133 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 VN1R2Q8NFZ6 395 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 PABPC5Q96DU9 382 aaKnown RBP18.62■□□□□ 0.57
CDK11A-215ENST00000478901 BORCS6Q96GS4 357 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 SENP8Q96LD8 212 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 MKNK1Q9BUB5 465 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 EMILIN2Q9BXX0 1053 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 CLDND1Q9NY35 253 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 PCDHB8Q9UN66 801 aa18.62■□□□□ 0.57
CDK11A-215ENST00000478901 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.61■□□□□ 0.57
CDK11A-215ENST00000478901 TEX28O15482 410 aa18.61■□□□□ 0.57
CDK11A-215ENST00000478901 NCK2O43639 380 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms