RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 NOMO3P69849 1222 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 FPGSQ05932 587 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 ZNF844Q08AG5 666 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 MGAT2Q10469 447 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 SF3B3Q15393 1217 aaKnown RBP1.93□□□□□ -2.1
SRRM1-211ENST00000478890 CYP2A13Q16696 494 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 ANO4Q32M45 955 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 NOMO2Q5JPE7 1267 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 OTUD7BQ6GQQ9 843 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 GADL1Q6ZQY3 521 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 STRA8Q7Z7C7 330 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 CLNKQ7Z7G1 428 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 NOP9Q86U38 636 aaKnown RBP1.93□□□□□ -2.1
SRRM1-211ENST00000478890 SPATS2Q86XZ4 545 aaKnown RBP1.93□□□□□ -2.1
SRRM1-211ENST00000478890 AOPEPQ8N6M6 819 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 B3GALNT2Q8NCR0 500 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 NLGN4YQ8NFZ3 816 aaPredicted RBP1.93□□□□□ -2.1
SRRM1-211ENST00000478890 WDR66Q8TBY9 1149 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 NUP133Q8WUM0 1156 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 LMBR1Q8WVP7 490 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 CASKIN2Q8WXE0 1202 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 TFAP2BQ92481 460 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 SMG7Q92540 1137 aaKnown RBP1.93□□□□□ -2.1
SRRM1-211ENST00000478890 CYFIP2Q96F07 1278 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 TMX3Q96JJ7 454 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 SLC2A13Q96QE2 648 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 MED15Q96RN5 788 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 LRFN3Q9BTN0 628 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 GSTO2Q9H4Y5 243 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 UNKLQ9H9P5 680 aaKnown RBP1.93□□□□□ -2.1
SRRM1-211ENST00000478890 TDP1Q9NUW8 608 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 RNF7Q9UBF6 113 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 DKK2Q9UBU2 259 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 INTUQ9ULD6 942 aa1.93□□□□□ -2.1
SRRM1-211ENST00000478890 PNPLA7Q6ZV29 1317 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 CCDC151A5D8V7 595 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 XPOTO43592 962 aaKnown RBP1.92□□□□□ -2.1
SRRM1-211ENST00000478890 PRKD3O94806 890 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 PRSS23O95084 383 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 CD1AP06126 327 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 GNAI3P08754 354 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 MTHFD1P11586 935 aaKnown RBP1.92□□□□□ -2.1
SRRM1-211ENST00000478890 FCER1AP12319 257 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 RPS7P62081 194 aaKnown RBP1.92□□□□□ -2.1
SRRM1-211ENST00000478890 GNAI1P63096 354 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 SRSF4Q08170 494 aaKnown RBP1.92□□□□□ -2.1
SRRM1-211ENST00000478890 PPP3CAQ08209 521 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 MTM1Q13496 603 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 METRNLQ641Q3 311 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 KAZNQ674X7 775 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 SEM1Q6ZVN7 128 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 AMIGO2Q86SJ2 522 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 DDX55Q8NHQ9 600 aaKnown RBP eCLIP1.92□□□□□ -2.1
SRRM1-211ENST00000478890 COG1Q8WTW3 980 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 SNX19Q92543 992 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 DPF2Q92785 391 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 HDAC10Q969S8 669 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 BOD1Q96IK1 185 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 UROC1Q96N76 676 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 IMPG2Q9BZV3 1241 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 PRDM13Q9H4Q3 707 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 VTA1Q9NP79 307 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 SLC23A1Q9UHI7 598 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 MCM8Q9UJA3 840 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 ST3GAL5Q9UNP4 418 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 GPR45Q9Y5Y3 372 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 WNT6Q9Y6F9 365 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 ATRNL1Q5VV63 1379 aa1.92□□□□□ -2.1
SRRM1-211ENST00000478890 CCDC195A0A1B0GUA6 201 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 CCDC78A2IDD5 438 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 MANSC4A6NHS7 340 aaPredicted RBP1.91□□□□□ -2.1
SRRM1-211ENST00000478890 LRRC3CA6NJW4 275 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 GRM6O15303 877 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 GPR39O43194 453 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 AGFG2O95081 481 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 MATN4O95460 622 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 RPLP2P05387 115 aaKnown RBP1.91□□□□□ -2.1
SRRM1-211ENST00000478890 EBLN1P0CF75 366 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 HSD3B2P26439 372 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 FOLR3P41439 243 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 RARRES1P49788 294 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 MAPK10P53779 464 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 PIGFQ07326 219 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 SCAPQ12770 1279 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 SEPT2Q15019 361 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 EZH2Q15910 746 aaKnown RBP1.91□□□□□ -2.1
SRRM1-211ENST00000478890 SRSF7Q16629 238 aaKnown RBP eCLIP1.91□□□□□ -2.12e-6■■■□□ 16.9
SRRM1-211ENST00000478890 NBPF8Q3BBV2 869 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 CD300EQ496F6 205 aaPredicted RBP1.91□□□□□ -2.1
SRRM1-211ENST00000478890 UTP14CQ5TAP6 766 aaKnown RBP1.91□□□□□ -2.1
SRRM1-211ENST00000478890 SDE2Q6IQ49 451 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 PGM2L1Q6PCE3 622 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 KCNK18Q7Z418 384 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 PEG10Q86TG7 708 aaKnown RBP1.91□□□□□ -2.1
SRRM1-211ENST00000478890 AFAP1L2Q8N4X5 818 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 ZGPATQ8N5A5 531 aaKnown RBP1.91□□□□□ -2.1
SRRM1-211ENST00000478890 SLC30A5Q8TAD4 765 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 NRG4Q8WWG1 115 aa1.91□□□□□ -2.1
SRRM1-211ENST00000478890 HOXB13Q92826 284 aaPredicted RBP1.91□□□□□ -2.1
SRRM1-211ENST00000478890 NACC2Q96BF6 587 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms