RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 MB21D1Q8N884 522 aa6.1□□□□□ -1.43
VPS50-214ENST00000477935 MDGA1Q8NFP4 955 aa6.1□□□□□ -1.43
VPS50-214ENST00000477935 ZNF480Q8WV37 535 aa6.1□□□□□ -1.43
VPS50-214ENST00000477935 ATXN2LQ8WWM7 1075 aaKnown RBP6.1□□□□□ -1.43
VPS50-214ENST00000477935 ST8SIA2Q92186 375 aa6.1□□□□□ -1.43
VPS50-214ENST00000477935 PCDH12Q9NPG4 1184 aa6.1□□□□□ -1.43
VPS50-214ENST00000477935 AURKAIP1Q9NWT8 199 aaPredicted RBP6.1□□□□□ -1.43
VPS50-214ENST00000477935 CICQ96RK0 1608 aaPredicted RBP6.1□□□□□ -1.43
VPS50-214ENST00000477935 TRIM75PA6NK02 468 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 AKR1B10O60218 316 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 AMHP03971 560 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 CRHR1P34998 444 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 IARSP41252 1262 aaKnown RBP6.09□□□□□ -1.43
VPS50-214ENST00000477935 MAN2A2P49641 1150 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 SCNN1GP51170 649 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 MAP2K1Q02750 393 aaPredicted RBP6.09□□□□□ -1.43
VPS50-214ENST00000477935 MALLQ13021 153 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 MST1LQ2TV78 715 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 INAVAQ3KP66 663 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 MUM1L1Q5H9M0 696 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 SYDE2Q5VT97 1194 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 C1QL3Q5VWW1 255 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 TMPRSS6Q8IU80 811 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 GPR156Q8NFN8 814 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 CDC5LQ99459 802 aaKnown RBP6.09□□□□□ -1.43
VPS50-214ENST00000477935 GREM2Q9H772 168 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 DMRT3Q9NQL9 472 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 GPRC5DQ9NZD1 345 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 TRPS1Q9UHF7 1281 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 TRHDEQ9UKU6 1024 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 NHSQ6T4R5 1651 aa6.09□□□□□ -1.43
VPS50-214ENST00000477935 AKAP12Q02952 1782 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 TRPM1Q7Z4N2 1603 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 KLRG2A4D1S0 409 aaPredicted RBP6.08□□□□□ -1.44
VPS50-214ENST00000477935 GLTPD2A6NH11 291 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 ALG1L2C9J202 215 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 GASTP01350 101 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 C1SP09871 688 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 AGXTP21549 392 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 ADSLP30566 484 aaPredicted RBP6.08□□□□□ -1.44
VPS50-214ENST00000477935 APBA1Q02410 837 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 ITKQ08881 620 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 MIIPQ5JXC2 388 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 Q6ZVL8 140 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 HTR3DQ70Z44 454 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 C1orf162Q8NEQ5 155 aaPredicted RBP6.08□□□□□ -1.44
VPS50-214ENST00000477935 ZCRB1Q8TBF4 217 aaKnown RBP6.08□□□□□ -1.44
VPS50-214ENST00000477935 MDM1Q8TC05 714 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 PGBD4Q96DM1 585 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 MTMR8Q96EF0 704 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 CPPED1Q9BRF8 314 aaPredicted RBP6.08□□□□□ -1.44
VPS50-214ENST00000477935 PDCD2LQ9BRP1 358 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 LSM14BQ9BX40 385 aaKnown RBP6.08□□□□□ -1.44
VPS50-214ENST00000477935 GPR87Q9BY21 358 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 VPS11Q9H270 941 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 RBM12Q9NTZ6 932 aaKnown RBP6.08□□□□□ -1.44
VPS50-214ENST00000477935 RNF181Q9P0P0 153 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 ZBTB21Q9ULJ3 1066 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 PCDHGA2Q9Y5H1 932 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 GPR45Q9Y5Y3 372 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 KAT6BQ8WYB5 2073 aa6.08□□□□□ -1.44
VPS50-214ENST00000477935 ANKRD36BQ8N2N9 1353 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 USP47Q96K76 1375 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 XDHP47989 1333 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 ADCY6O43306 1168 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 KATNA1O75449 491 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 MT-CO1P00395 513 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 HK1P19367 917 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 ECHS1P30084 290 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 MCAMP43121 646 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 PPP3CAQ08209 521 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 FOXE3Q13461 319 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 CNGB1Q14028 1251 aaPredicted RBP6.07□□□□□ -1.44
VPS50-214ENST00000477935 PTPROQ16827 1216 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 DCAF17Q5H9S7 520 aaPredicted RBP6.07□□□□□ -1.44
VPS50-214ENST00000477935 GJC2Q5T442 439 aaPredicted RBP6.07□□□□□ -1.44
VPS50-214ENST00000477935 PGM2L1Q6PCE3 622 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 CRIP3Q6Q6R5 217 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 FAM180AQ6UWF9 173 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 PDZD4Q76G19 769 aaPredicted RBP6.07□□□□□ -1.44
VPS50-214ENST00000477935 DOK3Q7L591 496 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 FAM83AQ86UY5 434 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 XYLT1Q86Y38 959 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 FAM177A1Q8N128 213 aaPredicted RBP6.07□□□□□ -1.44
VPS50-214ENST00000477935 HOXB13Q92826 284 aaPredicted RBP6.07□□□□□ -1.44
VPS50-214ENST00000477935 ZNF503Q96F45 646 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 PLEKHG4BQ96PX9 1271 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 SLC2A13Q96QE2 648 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 MNTQ99583 582 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 ZNF747Q9BV97 191 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 KRTAP4-2Q9BYR5 136 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 CCDC8Q9H0W5 538 aaPredicted RBP6.07□□□□□ -1.44
VPS50-214ENST00000477935 ZNF703Q9H7S9 590 aaPredicted RBP6.07□□□□□ -1.44
VPS50-214ENST00000477935 ZNF277Q9NRM2 450 aaPredicted RBP6.07□□□□□ -1.44
VPS50-214ENST00000477935 CEP72Q9P209 647 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 ABCC6O95255 1503 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 NSD3Q9BZ95 1437 aa6.07□□□□□ -1.44
VPS50-214ENST00000477935 CNTNAP1P78357 1384 aa6.06□□□□□ -1.44
VPS50-214ENST00000477935 KCPQ6ZWJ8 1503 aa6.06□□□□□ -1.44
VPS50-214ENST00000477935 A0A0G2JLW4 131 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms