RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 INPP5AQ14642 412 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 UBXN2BQ14CS0 331 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 GNPTABQ3T906 1256 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 GPATCH4Q5T3I0 446 aaKnown RBP7□□□□□ -1.29
LINC00173-202ENST00000477702 VPS53Q5VIR6 699 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 Q6ZS46 218 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 GOLM1Q8NBJ4 401 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 SMG8Q8ND04 991 aaKnown RBP7□□□□□ -1.29
LINC00173-202ENST00000477702 CASD1Q96PB1 797 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 PPP1R16BQ96T49 567 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 JMJD4Q9H9V9 463 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 KRT82Q9NSB4 513 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 C1orf112Q9NSG2 853 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 SEMA4GQ9NTN9 838 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 ECHDC1Q9NTX5 307 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 TMEM161AQ9NX61 479 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 ERAP1Q9NZ08 941 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 RAB23Q9ULC3 237 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 PCDHA4Q9UN74 947 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 ST3GAL5Q9UNP4 418 aa7□□□□□ -1.29
LINC00173-202ENST00000477702 SDK1Q7Z5N4 2213 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 GSTTP1A0A1W2PQM5 241 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 FAM170BA6NMN3 283 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 SRRM3A6NNA2 597 aaPredicted RBP6.99□□□□□ -1.29
LINC00173-202ENST00000477702 GCOM1H8Y6P7 765 aaPredicted RBP6.99□□□□□ -1.29
LINC00173-202ENST00000477702 TMPRSS2O15393 492 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 FIBPO43427 364 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 PPP1R11O60927 126 aaPredicted RBP6.99□□□□□ -1.29
LINC00173-202ENST00000477702 TIAF1O95411 115 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 POLR2MP0CAP2 368 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 ADH5P11766 374 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 SPINK2P20155 84 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 ERCC5P28715 1186 aaPredicted RBP6.99□□□□□ -1.29
LINC00173-202ENST00000477702 EIF4A3P38919 411 aaKnown RBP6.99□□□□□ -1.29
LINC00173-202ENST00000477702 STARD6P59095 220 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 FAM189BP81408 668 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 BMS1Q14692 1282 aaKnown RBP6.99□□□□□ -1.29
LINC00173-202ENST00000477702 WTAPQ15007 396 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 SNAP47Q5SQN1 464 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 IL31Q6EBC2 164 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 FDX2Q6P4F2 183 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 LRFN4Q6PJG9 635 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 PRR23CQ6ZRP0 262 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 PRR23BQ6ZRT6 265 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 TMEM173Q86WV6 379 aaPredicted RBP6.99□□□□□ -1.29
LINC00173-202ENST00000477702 TRIM42Q8IWZ5 723 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 ABI1Q8IZP0 508 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 LRRC43Q8N309 656 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 PANK1Q8TE04 598 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 TMEM40Q8WWA1 233 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 INPP4AQ96PE3 977 aaPredicted RBP6.99□□□□□ -1.29
LINC00173-202ENST00000477702 AMNQ9BXJ7 453 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 ZBP1Q9H171 429 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 MIR1-1HGQ9H1L0 117 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 ACBD3Q9H3P7 528 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 TCP11L1Q9NUJ3 509 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 EPS15L1Q9UBC2 864 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 ANAPC4Q9UJX5 808 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 AP4E1Q9UPM8 1137 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 C2orf16Q68DN1 1984 aa6.99□□□□□ -1.29
LINC00173-202ENST00000477702 KANSL1LA0AUZ9 987 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 RRN3P2A6NIE6 340 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 EIF4EBP3O60516 100 aaPredicted RBP6.98□□□□□ -1.29
LINC00173-202ENST00000477702 HMMRO75330 724 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 SSBP05455 408 aaKnown RBP eCLIP6.98□□□□□ -1.29
LINC00173-202ENST00000477702 RETP07949 1114 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 FGRP09769 529 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 KLRC2P26717 231 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 ALDH7A1P49419 539 aaKnown RBP6.98□□□□□ -1.29
LINC00173-202ENST00000477702 BCAR1P56945 870 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 HAND2P61296 217 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 GPC5P78333 572 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 GHRHRQ02643 423 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 SOX4Q06945 474 aaPredicted RBP6.98□□□□□ -1.29
LINC00173-202ENST00000477702 PWP1Q13610 501 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 HTR4Q13639 388 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 PLCB4Q15147 1175 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 CLLU1OSQ5K130 101 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 ZMYM1Q5SVZ6 1142 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 LAIR1Q6GTX8 287 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 DYMQ7RTS9 669 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 C12orf40Q86WS4 652 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 C2CD4AQ8NCU7 369 aaPredicted RBP6.98□□□□□ -1.29
LINC00173-202ENST00000477702 BCL7CQ8WUZ0 217 aaPredicted RBP6.98□□□□□ -1.29
LINC00173-202ENST00000477702 DDX1Q92499 740 aaKnown RBP6.98□□□□□ -1.29
LINC00173-202ENST00000477702 NELL1Q92832 810 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 PLPPR2Q96GM1 343 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 BORCS6Q96GS4 357 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 TMEM169Q96HH4 297 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 SHDQ96IW2 340 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 TTC14Q96N46 770 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 RPP25Q9BUL9 199 aaKnown RBP6.98□□□□□ -1.29
LINC00173-202ENST00000477702 SSBP4Q9BWG4 385 aaPredicted RBP6.98□□□□□ -1.29
LINC00173-202ENST00000477702 CYP4F12Q9HCS2 524 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 SLC2A4RGQ9NR83 387 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 UBP1Q9NZI7 540 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.98□□□□□ -1.29
LINC00173-202ENST00000477702 PCDHA2Q9Y5H9 948 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 NUMBLQ9Y6R0 609 aa6.98□□□□□ -1.29
LINC00173-202ENST00000477702 CLUHO75153 1309 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms