RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 ZNF365Q70YC5 407 aa19.23■□□□□ 0.67
CCM2-209ENST00000477605 CD248Q9HCU0 757 aa19.23■□□□□ 0.67
CCM2-209ENST00000477605 HOMER2Q9NSB8 354 aa19.23■□□□□ 0.67
CCM2-209ENST00000477605 NINJ2Q9NZG7 142 aa19.23■□□□□ 0.67
CCM2-209ENST00000477605 GABBR1Q9UBS5 961 aa19.23■□□□□ 0.67
CCM2-209ENST00000477605 NFASCO94856 1347 aa19.23■□□□□ 0.67
CCM2-209ENST00000477605 ATP2C2O75185 946 aa19.23■□□□□ 0.67
CCM2-209ENST00000477605 IFNAR2P48551 515 aa19.23■□□□□ 0.67
CCM2-209ENST00000477605 ARHGEF18Q6ZSZ5 1173 aa19.23■□□□□ 0.67
CCM2-209ENST00000477605 PHF13Q86YI8 300 aaPredicted RBP19.23■□□□□ 0.67
CCM2-209ENST00000477605 ZNF516Q92618 1163 aa19.23■□□□□ 0.67
CCM2-209ENST00000477605 BICD1Q96G01 975 aa19.23■□□□□ 0.67
CCM2-209ENST00000477605 CDHR1Q96JP9 859 aa19.23■□□□□ 0.67
CCM2-209ENST00000477605 FNBP1Q96RU3 617 aa19.23■□□□□ 0.67
CCM2-209ENST00000477605 MAF1Q9H063 256 aa19.23■□□□□ 0.67
CCM2-209ENST00000477605 ATP6V0A4Q9HBG4 840 aa19.23■□□□□ 0.67
CCM2-209ENST00000477605 TPX2Q9ULW0 747 aaKnown RBP19.23■□□□□ 0.67
CCM2-209ENST00000477605 ADGRA3Q8IWK6 1321 aa19.22■□□□□ 0.67
CCM2-209ENST00000477605 SBF1O95248 1867 aa19.22■□□□□ 0.67
CCM2-209ENST00000477605 C4BPAP04003 597 aaKnown RBP19.22■□□□□ 0.67
CCM2-209ENST00000477605 NR1H3Q13133 447 aa19.22■□□□□ 0.67
CCM2-209ENST00000477605 KYNUQ16719 465 aa19.22■□□□□ 0.67
CCM2-209ENST00000477605 CCDC38Q502W7 563 aa19.22■□□□□ 0.67
CCM2-209ENST00000477605 ABRAQ8N0Z2 381 aa19.22■□□□□ 0.67
CCM2-209ENST00000477605 ZNF526Q8TF50 670 aaPredicted RBP19.22■□□□□ 0.67
CCM2-209ENST00000477605 CPA5Q8WXQ8 436 aa19.22■□□□□ 0.67
CCM2-209ENST00000477605 ATG4AQ8WYN0 398 aa19.22■□□□□ 0.67
CCM2-209ENST00000477605 MYCBPQ99417 103 aaPredicted RBP19.22■□□□□ 0.67
CCM2-209ENST00000477605 PI4K2AQ9BTU6 479 aa19.22■□□□□ 0.67
CCM2-209ENST00000477605 CNTN6Q9UQ52 1028 aa19.22■□□□□ 0.67
CCM2-209ENST00000477605 ZBTB12Q9Y330 459 aaPredicted RBP19.22■□□□□ 0.67
CCM2-209ENST00000477605 UMODL1Q5DID0 1318 aa19.22■□□□□ 0.67
CCM2-209ENST00000477605 NDC80O14777 642 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 ZNF862O60290 1169 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 HLA-DRAP01903 254 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 RALAP11233 206 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 MAP2K2P36507 400 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 C1QBPQ07021 282 aaKnown RBP19.21■□□□□ 0.67
CCM2-209ENST00000477605 GALNTL6Q49A17 601 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 TBC1D10BQ4KMP7 808 aaPredicted RBP19.21■□□□□ 0.67
CCM2-209ENST00000477605 PLEKHA7Q6IQ23 1121 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 PPP1R21Q6ZMI0 780 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 GRAMD1AQ96CP6 724 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 FAM212AQ96EL1 285 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 OSBPL8Q9BZF1 889 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 ARL2BPQ9Y2Y0 163 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 TCP11X1B4DZS4 312 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 NR3C2P08235 984 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 BRAFP15056 766 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 ACO1P21399 889 aaKnown RBP19.21■□□□□ 0.67
CCM2-209ENST00000477605 TBXAS1P24557 533 aaPredicted RBP19.21■□□□□ 0.67
CCM2-209ENST00000477605 LIG4P49917 911 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 SLFN12LQ6IEE8 588 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 CRELD2Q6UXH1 353 aaPredicted RBP19.21■□□□□ 0.67
CCM2-209ENST00000477605 HERPUD2Q9BSE4 406 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 TRIM7Q9C029 511 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 XPNPEP1Q9NQW7 623 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 ZNRF3Q9ULT6 936 aa19.21■□□□□ 0.67
CCM2-209ENST00000477605 NFKBIEO00221 500 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 STAM2O75886 525 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 GJB6O95452 261 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 LDHAP00338 332 aaKnown RBP19.2■□□□□ 0.66
CCM2-209ENST00000477605 PIGRP01833 764 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 KCNA2P16389 499 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 MAMLD1Q13495 774 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 DRICH1Q6PGQ1 229 aaPredicted RBP19.2■□□□□ 0.66
CCM2-209ENST00000477605 TAS1R3Q7RTX0 852 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 FAM228AQ86W67 206 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 ANKRD35Q8N283 1001 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 MAGEB18Q96M61 343 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 GPBP1L1Q9HC44 474 aaPredicted RBP19.2■□□□□ 0.66
CCM2-209ENST00000477605 KCNK9Q9NPC2 374 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 CYP26B1Q9NR63 512 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 NKIRAS1Q9NYS0 192 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 ADAM22Q9P0K1 906 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 RNF181Q9P0P0 153 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 R3HDM2Q9Y2K5 976 aaKnown RBP19.2■□□□□ 0.66
CCM2-209ENST00000477605 EZRP15311 586 aaKnown RBP19.2■□□□□ 0.66
CCM2-209ENST00000477605 PIK3CAP42336 1068 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 NOMO3P69849 1222 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 STRN3Q13033 797 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 CUL2Q13617 745 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 NEDD9Q14511 834 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 HIBCHQ6NVY1 386 aaPredicted RBP19.2■□□□□ 0.66
CCM2-209ENST00000477605 RCOR2Q8IZ40 523 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 ZCCHC9Q8N567 271 aaKnown RBP19.2■□□□□ 0.66
CCM2-209ENST00000477605 UBN1Q9NPG3 1134 aa19.2■□□□□ 0.66
CCM2-209ENST00000477605 A0A1B0GUA9 196 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 VWA5AO00534 786 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 WNT10BO00744 389 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 ATP6V1G2O95670 118 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 TNNI1P19237 187 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 KLRC2P26717 231 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 OAZ1P54368 228 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 BAATQ14032 418 aaPredicted RBP19.19■□□□□ 0.66
CCM2-209ENST00000477605 XKR3Q5GH77 459 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 LRRC38Q5VT99 294 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 IZUMO3Q5VZ72 239 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 CHADLQ6NUI6 762 aa19.19■□□□□ 0.66
CCM2-209ENST00000477605 SWSAP1Q6NVH7 229 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms