RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 PLGRKTQ9HBL7 147 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 CLIC5Q9NZA1 410 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 STXBP5LQ9Y2K9 1186 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 TELO2Q9Y4R8 837 aa13.4□□□□□ -0.26
RTFDC1-207ENST00000477573 ARHGAP10A1A4S6 786 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 CCDC169A6NNP5 214 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 TMEM114B3SHH9 223 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 ENTPD5O75356 428 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 EEF2P13639 858 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 SERPINB6P35237 376 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 ADCY7P51828 1080 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 DSG1Q02413 1049 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 LPIN1Q14693 890 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 SHROOM1Q2M3G4 852 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 FKBP1CQ5VVH2 108 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 FYB2Q5VWT5 728 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 C4orf50Q6ZRC1 276 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 USP49Q70CQ1 688 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 FAM20CQ8IXL6 584 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 ADGRF4Q8IZF3 695 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 ARHGAP24Q8N264 748 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 VPS37AQ8NEZ2 397 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 CEP70Q8NHQ1 597 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 GLT8D2Q9H1C3 349 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 JMJD4Q9H9V9 463 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 METTL5Q9NRN9 209 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 THEGQ9P2T0 379 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 GGT7Q9UJ14 662 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 FAF1Q9UNN5 650 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 PPME1Q9Y570 386 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 LOC105371267A0A1B0GV96 52 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 ZBTB7AO95365 584 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 KRT4P19013 534 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 SLC1A4P43007 532 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 COPB1P53618 953 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 WASHC5Q12768 1159 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 KRT31Q15323 416 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 SPA17Q15506 151 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 MYLK3Q32MK0 819 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 PPP2R2DQ66LE6 453 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 PDXDC1Q6P996 788 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 INTS8Q75QN2 995 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 TMC3Q7Z5M5 1100 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 NEK8Q86SG6 692 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 C4orf32Q8N8J7 132 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 MTMR14Q8NCE2 650 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 PYROXD1Q8WU10 500 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 FAM151AQ8WW52 585 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 JDP2Q8WYK2 163 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 SNF8Q96H20 258 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 MED30Q96HR3 178 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 UNKQ9C0B0 810 aaKnown RBP13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 CEP44Q9C0F1 390 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 PSTPIP2Q9H939 334 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 USP29Q9HBJ7 922 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 VTA1Q9NP79 307 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 SELENONQ9NZV5 590 aa13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 CRNNQ9UBG3 495 aaPredicted RBP13.39□□□□□ -0.27
RTFDC1-207ENST00000477573 TTC26A0AVF1 554 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 FUOMA2VDF0 154 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 FAM196BA6NMK8 535 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 PIK3CDO00329 1044 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 ZBTB5O15062 677 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 ADAMTS3O15072 1205 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 VILLO15195 856 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 NUDT17P0C025 328 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 HSPA1AP0DMV8 641 aaKnown RBP13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 HSPA1BP0DMV9 641 aaKnown RBP13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 RXRGP48443 463 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 RPL26P61254 145 aaKnown RBP13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 SLFN13Q68D06 897 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 DHRS4L2Q6PKH6 230 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 GSDMAQ96QA5 445 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 AS3MTQ9HBK9 375 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 COMMD8Q9NX08 183 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 ZNF70Q9UC06 446 aaPredicted RBP13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 DMTF1Q9Y222 760 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 TCP10L2B9ZVM9 353 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 CAPN9O14815 690 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 AP1G1O43747 822 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 CDC25AP30304 524 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 TUFMP49411 452 aaKnown RBP13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 CCR3P51677 355 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 NAA20P61599 178 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 TUBA3CQ13748 450 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 SPDYE2Q495Y8 402 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 BORAQ6PGQ7 559 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 CAPN12Q6ZSI9 719 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 KCTD1Q719H9 257 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 TAOK1Q7L7X3 1001 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 GMCL1P1Q8NEA9 526 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 KRT12Q99456 494 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 TUT1Q9H6E5 874 aaKnown RBP13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 ZNF304Q9HCX3 659 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 GID8Q9NWU2 228 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 UVRAGQ9P2Y5 699 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 ANGPTL2Q9UKU9 493 aa13.38□□□□□ -0.27
RTFDC1-207ENST00000477573 BICDL2A1A5D9 508 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms