RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 PAAF1Q9BRP4 392 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 CRACR2AQ9BSW2 395 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 TRIM5Q9C035 493 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 XPO4Q9C0E2 1151 aaKnown RBP17.44■□□□□ 0.38
VHL-203ENST00000477538 CWH43Q9H720 699 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 GRPEL1Q9HAV7 217 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 GCNT4Q9P109 453 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 MYH10P35580 1976 aa17.44■□□□□ 0.38
VHL-203ENST00000477538 GRXCR1A8MXD5 290 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 PIRO00625 290 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 CLSTN1O94985 981 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 TPM3P06753 285 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 OR1G1P47890 313 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 RABGGTBP53611 331 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 MYL6P60660 151 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 UPP1Q16831 310 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 EXOC3L4Q17RC7 722 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 SPOUT1Q5T280 376 aaKnown RBP17.43■□□□□ 0.38
VHL-203ENST00000477538 FAM109BQ6ICB4 259 aaPredicted RBP17.43■□□□□ 0.38
VHL-203ENST00000477538 CHRDL2Q6WN34 429 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 TDHQ8IZJ6 230 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 SP7Q8TDD2 431 aaPredicted RBP17.43■□□□□ 0.38
VHL-203ENST00000477538 RABGGTAQ92696 567 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 SEMA4DQ92854 862 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 ZNF560Q96MR9 790 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 TMEM175Q9BSA9 504 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 IMPG2Q9BZV3 1241 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 RAB20Q9NX57 234 aa17.43■□□□□ 0.38
VHL-203ENST00000477538 MRPL42Q9Y6G3 142 aaKnown RBP17.43■□□□□ 0.38
VHL-203ENST00000477538 SLC11A1P49279 550 aa17.42■□□□□ 0.38
VHL-203ENST00000477538 BCAR1P56945 870 aa17.42■□□□□ 0.38
VHL-203ENST00000477538 ZNF699Q32M78 642 aa17.42■□□□□ 0.38
VHL-203ENST00000477538 LRRC52Q8N7C0 313 aa17.42■□□□□ 0.38
VHL-203ENST00000477538 CCDC150Q8NCX0 1101 aa17.42■□□□□ 0.38
VHL-203ENST00000477538 EHBP1Q8NDI1 1231 aa17.42■□□□□ 0.38
VHL-203ENST00000477538 HPDLQ96IR7 371 aa17.42■□□□□ 0.38
VHL-203ENST00000477538 ERGIC2Q96RQ1 377 aa17.42■□□□□ 0.38
VHL-203ENST00000477538 PI4K2AQ9BTU6 479 aa17.42■□□□□ 0.38
VHL-203ENST00000477538 INTS2Q9H0H0 1204 aaKnown RBP17.42■□□□□ 0.38
VHL-203ENST00000477538 PRG3Q9Y2Y8 225 aaPredicted RBP17.42■□□□□ 0.38
VHL-203ENST00000477538 ATG2AQ2TAZ0 1938 aa17.42■□□□□ 0.38
VHL-203ENST00000477538 LCHNA4D1U4 455 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 NRP1O14786 923 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 LRRN2O75325 713 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 KIF4AO95239 1232 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 ASS1P00966 412 aaKnown RBP17.41■□□□□ 0.38
VHL-203ENST00000477538 GALTP07902 379 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 LAG3P18627 525 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 SLC9A1P19634 815 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 PON1P27169 355 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 ATICP31939 592 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 PNPLA4P41247 253 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 ALDH7A1P49419 539 aaKnown RBP17.41■□□□□ 0.38
VHL-203ENST00000477538 TAF6P49848 677 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 NOP14P78316 857 aaKnown RBP17.41■□□□□ 0.38
VHL-203ENST00000477538 KCNMA1Q12791 1236 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 MYO1EQ12965 1108 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 SYCP1Q15431 976 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 SGSM1Q2NKQ1 1148 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 SV2CQ496J9 727 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 WDR44Q5JSH3 913 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 C3orf58Q8NDZ4 430 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 LMO3Q8TAP4 145 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 TAF4BQ92750 862 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 XYLT2Q9H1B5 865 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 PRO3102Q9H379 93 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.41■□□□□ 0.38
VHL-203ENST00000477538 FAN1Q9Y2M0 1017 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 PCDHA11Q9Y5I1 949 aa17.41■□□□□ 0.38
VHL-203ENST00000477538 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.4■□□□□ 0.38
VHL-203ENST00000477538 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.4■□□□□ 0.38
VHL-203ENST00000477538 TMEM189-UBE2V1I3L0A0 370 aa17.4■□□□□ 0.38
VHL-203ENST00000477538 B3GAT3O94766 335 aa17.4■□□□□ 0.38
VHL-203ENST00000477538 STAU1O95793 577 aaKnown RBP17.4■□□□□ 0.38
VHL-203ENST00000477538 ALDH2P05091 517 aa17.4■□□□□ 0.38
VHL-203ENST00000477538 PBX3P40426 434 aa17.4■□□□□ 0.38
VHL-203ENST00000477538 PTPN21Q16825 1174 aa17.4■□□□□ 0.38
VHL-203ENST00000477538 TRIM65Q6PJ69 517 aa17.4■□□□□ 0.38
VHL-203ENST00000477538 DCLRE1AQ6PJP8 1040 aa17.4■□□□□ 0.38
VHL-203ENST00000477538 KCNT2Q6UVM3 1135 aa17.4■□□□□ 0.38
VHL-203ENST00000477538 COLGALT1Q8NBJ5 622 aa17.4■□□□□ 0.38
VHL-203ENST00000477538 HASPINQ8TF76 798 aa17.4■□□□□ 0.38
VHL-203ENST00000477538 ELMO3Q96BJ8 720 aa17.4■□□□□ 0.38
VHL-203ENST00000477538 PCMTD1Q96MG8 357 aaPredicted RBP17.4■□□□□ 0.38
VHL-203ENST00000477538 ZNF558Q96NG5 402 aa17.4■□□□□ 0.38
VHL-203ENST00000477538 COLEC11Q9BWP8 271 aa17.4■□□□□ 0.38
VHL-203ENST00000477538 LSM14BQ9BX40 385 aaKnown RBP17.4■□□□□ 0.38
VHL-203ENST00000477538 SIK3Q9Y2K2 1263 aa17.4■□□□□ 0.38
VHL-203ENST00000477538 NUB1Q9Y5A7 615 aa17.4■□□□□ 0.38
VHL-203ENST00000477538 A0A1W2PQC6 194 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 CARNS1A5YM72 827 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 NT5C1B-RDH14C9J2C7 533 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 F8W810 466 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 ITGB1P05556 798 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 MYOGP15173 224 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 IGFBP6P24592 240 aaPredicted RBP17.39■□□□□ 0.37
VHL-203ENST00000477538 PBX1P40424 430 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 KLK7P49862 253 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 MRE11P49959 708 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 ZNF75DP51815 510 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms