RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 GEN1Q17RS7 908 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 EFCAB12Q6NXP0 572 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 ZSWIM2Q8NEG5 633 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 SENP7Q9BQF6 1050 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 TIPINQ9BVW5 301 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 PABPC3Q9H361 631 aaKnown RBP11.67□□□□□ -0.54
COL27A1-204ENST00000477421 FGFR1OP2Q9NVK5 253 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 ASTN2O75129 1339 aaPredicted RBP11.67□□□□□ -0.54
COL27A1-204ENST00000477421 TMEM120BA0PK00 339 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 EIF4E1BA6NMX2 242 aaKnown RBP11.67□□□□□ -0.54
COL27A1-204ENST00000477421 P4HA2O15460 535 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 CST8O60676 142 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 CLK2P49760 499 aaKnown RBP11.67□□□□□ -0.54
COL27A1-204ENST00000477421 MYL6P60660 151 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 SNED1Q8TER0 1413 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 INPP4AQ96PE3 977 aaPredicted RBP11.67□□□□□ -0.54
COL27A1-204ENST00000477421 XPO6Q96QU8 1125 aaKnown RBP11.67□□□□□ -0.54
COL27A1-204ENST00000477421 G3BP2Q9UN86 482 aaKnown RBP11.67□□□□□ -0.54
COL27A1-204ENST00000477421 H0Y3Z8 333 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 MAFGO15525 162 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 ABCD1P33897 745 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 MAP2K2P36507 400 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 EFNA5P52803 228 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 AMHR2Q16671 573 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 GLRA4Q5JXX5 417 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 FBXO16Q8IX29 292 aaPredicted RBP11.67□□□□□ -0.54
COL27A1-204ENST00000477421 MYCBPAPQ8TBZ2 947 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 EPS8L1Q8TE68 723 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 ALG3Q92685 438 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 SLC13A1Q9BZW2 595 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 COL20A1Q9P218 1284 aa11.67□□□□□ -0.54
COL27A1-204ENST00000477421 PDGFRAP16234 1089 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 ARL4CP56559 192 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 MICAL1Q8TDZ2 1067 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 RPS6KC1Q96S38 1066 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 DHX35Q9H5Z1 703 aaKnown RBP11.66□□□□□ -0.54
COL27A1-204ENST00000477421 NEU2Q9Y3R4 380 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 ARHGAP42A6NI28 874 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 DDNO94850 711 aaPredicted RBP11.66□□□□□ -0.54
COL27A1-204ENST00000477421 SUPT20HL2P0C7V6 817 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 RARAP10276 462 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 ARL4AP40617 200 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 BCAR1P56945 870 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 TTMPQ5BVD1 217 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 ATF7IP2Q5U623 682 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 MORC4Q8TE76 937 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 MAML1Q92585 1016 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 ATP2A3Q93084 1043 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 EFCC1Q9HA90 598 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 A8MXQ7 604 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 SDC4P31431 198 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 RAP1GAPP47736 663 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 SARNPP82979 210 aaKnown RBP11.66□□□□□ -0.54
COL27A1-204ENST00000477421 FAXCQ5TGI0 409 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 TWF2Q6IBS0 349 aaKnown RBP11.66□□□□□ -0.54
COL27A1-204ENST00000477421 TRIM72Q6ZMU5 477 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 SEC16BQ96JE7 1060 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 TRAIPQ9BWF2 469 aa11.66□□□□□ -0.54
COL27A1-204ENST00000477421 WRAP73Q9P2S5 460 aaPredicted RBP11.66□□□□□ -0.54
COL27A1-204ENST00000477421 CREB3O43889 395 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 APRTP07741 180 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 PRKCIP41743 596 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 RPL21P46778 160 aaKnown RBP11.65□□□□□ -0.54
COL27A1-204ENST00000477421 EIF3EP60228 445 aaKnown RBP11.65□□□□□ -0.54
COL27A1-204ENST00000477421 IFI35P80217 286 aaPredicted RBP11.65□□□□□ -0.54
COL27A1-204ENST00000477421 HYIQ5T013 277 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 PRUNE1Q86TP1 453 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 FEZF2Q8TBJ5 459 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 PIK3CDO00329 1044 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 PIAS1O75925 651 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 ITGB3P05106 788 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 MYBL1P10243 752 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 KITP10721 976 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 GZMAP12544 262 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 FLT3P36888 993 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 CDH8P55286 799 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 PTENP60484 403 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 SPARCL1Q14515 664 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 HIF1AQ16665 826 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 SGSM1Q2NKQ1 1148 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 SDCCAG8Q86SQ7 713 aaPredicted RBP11.65□□□□□ -0.54
COL27A1-204ENST00000477421 SIAH1Q8IUQ4 282 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 RAPGEF5Q92565 580 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 RUBCNQ92622 972 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 C10orf88Q9H8K7 445 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 AJAP1Q9UKB5 411 aaPredicted RBP11.65□□□□□ -0.54
COL27A1-204ENST00000477421 STRIP2Q9ULQ0 834 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 NR2E1Q9Y466 385 aa11.65□□□□□ -0.54
COL27A1-204ENST00000477421 IGLV3-22A0A075B6J6 115 aa11.65□□□□□ -0.55
COL27A1-204ENST00000477421 TOM1L1O75674 476 aa11.65□□□□□ -0.55
COL27A1-204ENST00000477421 BAG2O95816 211 aa11.65□□□□□ -0.55
COL27A1-204ENST00000477421 FAM107AO95990 144 aa11.65□□□□□ -0.55
COL27A1-204ENST00000477421 ITIH2P19823 946 aa11.65□□□□□ -0.55
COL27A1-204ENST00000477421 SLC1A1P43005 524 aa11.65□□□□□ -0.55
COL27A1-204ENST00000477421 MRPS9P82933 396 aaKnown RBP11.65□□□□□ -0.55
COL27A1-204ENST00000477421 ITKQ08881 620 aa11.65□□□□□ -0.55
COL27A1-204ENST00000477421 ZNF844Q08AG5 666 aa11.65□□□□□ -0.55
COL27A1-204ENST00000477421 BTNL9Q6UXG8 535 aa11.65□□□□□ -0.55
COL27A1-204ENST00000477421 PPFIBP2Q8ND30 876 aa11.65□□□□□ -0.55
COL27A1-204ENST00000477421 CAVIN3Q969G5 261 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms