RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 PLCB3Q01970 1234 aa17.15■□□□□ 0.34
COPS3-207ENST00000477299 SURF1Q15526 300 aa17.15■□□□□ 0.34
COPS3-207ENST00000477299 DUOXA2Q1HG44 320 aa17.15■□□□□ 0.34
COPS3-207ENST00000477299 TIGD5Q53EQ6 642 aa17.15■□□□□ 0.34
COPS3-207ENST00000477299 FUT10Q6P4F1 479 aa17.15■□□□□ 0.34
COPS3-207ENST00000477299 FOXR2Q6PJQ5 311 aa17.15■□□□□ 0.34
COPS3-207ENST00000477299 CREBRFQ8IUR6 639 aa17.15■□□□□ 0.34
COPS3-207ENST00000477299 TMEM169Q96HH4 297 aa17.15■□□□□ 0.34
COPS3-207ENST00000477299 CDX2Q99626 313 aaPredicted RBP17.15■□□□□ 0.34
COPS3-207ENST00000477299 C11orf84Q9BUA3 381 aaPredicted RBP17.15■□□□□ 0.34
COPS3-207ENST00000477299 MKNK1Q9BUB5 465 aa17.15■□□□□ 0.34
COPS3-207ENST00000477299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.15■□□□□ 0.34
COPS3-207ENST00000477299 MTMR10Q9NXD2 777 aa17.15■□□□□ 0.34
COPS3-207ENST00000477299 TSC2P49815 1807 aa17.14■□□□□ 0.34
COPS3-207ENST00000477299 SLC16A3O15427 465 aaKnown RBP17.14■□□□□ 0.33
COPS3-207ENST00000477299 TNNC2P02585 160 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 KRT19P08727 400 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 KRT13P13646 458 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 LILRA4P59901 499 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 NCAPHQ15003 741 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 CCDC40Q4G0X9 1142 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 C15orf39Q6ZRI6 1047 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 INTS8Q75QN2 995 aaKnown RBP17.14■□□□□ 0.33
COPS3-207ENST00000477299 SV2AQ7L0J3 742 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 DDX53Q86TM3 631 aaKnown RBP17.14■□□□□ 0.33
COPS3-207ENST00000477299 NT5DC4Q86YG4 428 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 RNF168Q8IYW5 571 aaPredicted RBP17.14■□□□□ 0.33
COPS3-207ENST00000477299 VPS52Q8N1B4 723 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 CACTINQ8WUQ7 758 aaKnown RBP17.14■□□□□ 0.33
COPS3-207ENST00000477299 SLC35C1Q96A29 364 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 DDX27Q96GQ7 796 aaKnown RBP17.14■□□□□ 0.33
COPS3-207ENST00000477299 ANKRD36BP1Q96IX9 119 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 UROC1Q96N76 676 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 TSPAN18Q96SJ8 248 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 HSD3B7Q9H2F3 369 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 FANCLQ9NW38 375 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 ARMCX3Q9UH62 379 aaPredicted RBP17.14■□□□□ 0.33
COPS3-207ENST00000477299 DACH1Q9UI36 760 aa17.14■□□□□ 0.33
COPS3-207ENST00000477299 TIMM13Q9Y5L4 95 aaPredicted RBP17.14■□□□□ 0.33
COPS3-207ENST00000477299 HIDE1A8MVS5 230 aa17.13■□□□□ 0.33
COPS3-207ENST00000477299 TMEM189-UBE2V1I3L0A0 370 aa17.13■□□□□ 0.33
COPS3-207ENST00000477299 LETM1O95202 739 aaPredicted RBP17.13■□□□□ 0.33
COPS3-207ENST00000477299 CCDC192P0DO97 292 aa17.13■□□□□ 0.33
COPS3-207ENST00000477299 TKTP29401 623 aaKnown RBP17.13■□□□□ 0.33
COPS3-207ENST00000477299 PPM1AP35813 382 aa17.13■□□□□ 0.33
COPS3-207ENST00000477299 MYL6P60660 151 aa17.13■□□□□ 0.33
COPS3-207ENST00000477299 TPD52L1Q16890 204 aaPredicted RBP17.13■□□□□ 0.33
COPS3-207ENST00000477299 CBWD6Q4V339 395 aa17.13■□□□□ 0.33
COPS3-207ENST00000477299 DCAF17Q5H9S7 520 aaPredicted RBP17.13■□□□□ 0.33
COPS3-207ENST00000477299 CBWD3Q5JTY5 395 aa17.13■□□□□ 0.33
COPS3-207ENST00000477299 CBWD5Q5RIA9 395 aa17.13■□□□□ 0.33
COPS3-207ENST00000477299 FAM171A1Q5VUB5 890 aa17.13■□□□□ 0.33
COPS3-207ENST00000477299 TCERG1LQ5VWI1 586 aa17.13■□□□□ 0.33
COPS3-207ENST00000477299 GPR153Q6NV75 609 aa17.13■□□□□ 0.33
COPS3-207ENST00000477299 FRMD5Q7Z6J6 570 aa17.13■□□□□ 0.33
COPS3-207ENST00000477299 DHX40Q8IX18 779 aaKnown RBP17.13■□□□□ 0.33
COPS3-207ENST00000477299 AOPEPQ8N6M6 819 aa17.13■□□□□ 0.33
COPS3-207ENST00000477299 ENOX1Q8TC92 643 aaKnown RBP17.13■□□□□ 0.33
COPS3-207ENST00000477299 CNOT6LQ96LI5 555 aaKnown RBP17.13■□□□□ 0.33
COPS3-207ENST00000477299 NFE2L3Q9Y4A8 694 aa17.13■□□□□ 0.33
COPS3-207ENST00000477299 PLXNA3P51805 1871 aa17.13■□□□□ 0.33
COPS3-207ENST00000477299 C2CD2LO14523 706 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 XPOTO43592 962 aaKnown RBP17.12■□□□□ 0.33
COPS3-207ENST00000477299 IGFBP4P22692 258 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 KRT17Q04695 432 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 BIRC3Q13489 604 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 IQCB1Q15051 598 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 ZACNQ401N2 412 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 CT47A1Q5JQC4 288 aaPredicted RBP17.12■□□□□ 0.33
COPS3-207ENST00000477299 RTP2Q5QGT7 225 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 PLPP4Q5VZY2 271 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 PRSS55Q6UWB4 352 aaPredicted RBP17.12■□□□□ 0.33
COPS3-207ENST00000477299 ADGRD2Q7Z7M1 963 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 CEP57Q86XR8 500 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 TRIM59Q8IWR1 403 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 TAS1R2Q8TE23 839 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 SEMA4DQ92854 862 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 PI4K2AQ9BTU6 479 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 ZBP1Q9H171 429 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 NUB1Q9Y5A7 615 aa17.12■□□□□ 0.33
COPS3-207ENST00000477299 REV3LO60673 3130 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 IKBKBO14920 756 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 FSCN2O14926 492 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 CXCL14O95715 111 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 HLA-DRAP01903 254 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 SOD2P04179 222 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 RPL17P18621 184 aaKnown RBP17.11■□□□□ 0.33
COPS3-207ENST00000477299 GTF2F1P35269 517 aaKnown RBP eCLIP17.11■□□□□ 0.33
COPS3-207ENST00000477299 MARSP56192 900 aaKnown RBP17.11■□□□□ 0.33
COPS3-207ENST00000477299 RBP5P82980 135 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 KIAA0319Q5VV43 1072 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 SPOPLQ6IQ16 392 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 SENP8Q96LD8 212 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 TCF25Q9BQ70 676 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 XYLT2Q9H1B5 865 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 TLR9Q9NR96 1032 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 CHST7Q9NS84 486 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 ITGA11Q9UKX5 1188 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 MTCH2Q9Y6C9 303 aa17.11■□□□□ 0.33
COPS3-207ENST00000477299 LILRB3O75022 631 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms