RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 MYL7Q01449 175 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 DNAJC3Q13217 504 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 FAM43BQ6ZT52 329 aaPredicted RBP16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 TRABD2AQ86V40 505 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 ARHGAP24Q8N264 748 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 SCG3Q8WXD2 468 aaKnown RBP16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 PCMTD2Q9NV79 361 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 HERC5Q9UII4 1024 aaKnown RBP16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 UTRNP46939 3433 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 TMEM110-MUSTN1A8MSY1 372 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 A8MXQ7 604 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 SPOPO43791 374 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 MED24O75448 989 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 FTLP02792 175 aaPredicted RBP16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 TROVE2P10155 538 aaKnown RBP eCLIP16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 ITGA8P53708 1063 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 MESDQ14696 234 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 KYNUQ16719 465 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 FAM83AQ86UY5 434 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 CYP4X1Q8N118 509 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 KLHL23Q8NBE8 558 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 MAML1Q92585 1016 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 STMN2Q93045 179 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 OPTNQ96CV9 577 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 ZBED3Q96IU2 234 aaPredicted RBP16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 MBOAT7Q96N66 472 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 OLFM3Q96PB7 478 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 CYLDQ9NQC7 956 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 DDX43Q9NXZ2 648 aaKnown RBP16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 ANAPC5Q9UJX4 755 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 ANGPTL2Q9UKU9 493 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 TMCO1Q9UM00 188 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 PCDHB13Q9Y5F0 798 aa16.19■□□□□ 0.18
CLSTN1-205ENST00000477264 GCNT3O95395 438 aa16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 PSMG1O95456 288 aa16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 GZMAP12544 262 aa16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 IVDP26440 423 aa16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 TMED2Q15363 201 aa16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 TAF1BQ53T94 588 aaPredicted RBP16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 FOXB2Q5VYV0 432 aa16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 TATDN1Q6P1N9 297 aa16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 NLRP9Q7RTR0 991 aa16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 CFAP57Q96MR6 1250 aa16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 TTC25Q96NG3 672 aa16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 ZNF184Q99676 751 aaPredicted RBP16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 BTBD10Q9BSF8 475 aa16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 SSU72Q9NP77 194 aaKnown RBP16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 UVRAGQ9P2Y5 699 aa16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 ZNF541Q9H0D2 1346 aa16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 SBF1O95248 1867 aa16.18■□□□□ 0.18
CLSTN1-205ENST00000477264 CYP3A7-CYP3A51PA0A087WV96 503 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 TBX3O15119 743 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 EXOC3O60645 756 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 CBX6O95503 412 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 CYP3A7P24462 503 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 RPA1P27694 616 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 KCNJ1P48048 391 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 TNFAIP1Q13829 316 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 RASA2Q15283 850 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 LCA5Q86VQ0 697 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 CENPKQ9BS16 269 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 UBA5Q9GZZ9 404 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 ATXN10Q9UBB4 475 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 UMODL1Q5DID0 1318 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 IGKV6D-41A0A0C4DH26 115 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 TCRBV7S2A1N4TA0A589 114 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 USP17L5A8MUK1 530 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 SLURP2P0DP57 97 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 IMPDH2P12268 514 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 SERPINB4P48594 390 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 CENPCQ03188 943 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 UBE2SQ16763 222 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 KHDC1Q4VXA5 237 aaKnown RBP16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 TMEM63BQ5T3F8 832 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 POTEGQ6S5H5 508 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 STXBP4Q6ZWJ1 553 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 CLNKQ7Z7G1 428 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 RBM12BQ8IXT5 1001 aaKnown RBP16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 SMC6Q96SB8 1091 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 PHF24Q9UPV7 400 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 COMMD3-BMI1R4GMX3 469 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 CNTNAP1P78357 1384 aa16.17■□□□□ 0.18
CLSTN1-205ENST00000477264 CAPN9O14815 690 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 CYP1A2P05177 515 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 SNHG28P0DPA3 235 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 DLATP10515 647 aaKnown RBP16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 CETPP11597 493 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 GSTT1P30711 240 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 RANBP1P43487 201 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 SESN3P58005 492 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 ABCB5Q2M3G0 1257 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 CTC1Q2NKJ3 1217 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 PHLDB3Q6NSJ2 640 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 SAMD7Q7Z3H4 446 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 PALB2Q86YC2 1186 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 GPC2Q8N158 579 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 STKLD1Q8NE28 680 aa16.16■□□□□ 0.18
CLSTN1-205ENST00000477264 ZNF564Q8TBZ8 553 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms