RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 CLSTN3Q9BQT9 956 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 COL25A1Q9BXS0 654 aaPredicted RBP13.5□□□□□ -0.25
APTX-220ENST00000476858 S1PR5Q9H228 398 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 TMEM206Q9H813 350 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 RXFP1Q9HBX9 757 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 CD320Q9NPF0 282 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 RBAKQ9NYW8 714 aaPredicted RBP13.5□□□□□ -0.25
APTX-220ENST00000476858 COG5Q9UP83 839 aa13.5□□□□□ -0.25
APTX-220ENST00000476858 SF3B1O75533 1304 aaKnown RBP eCLIP13.49□□□□□ -0.255e-11■■■■■ 34.5
APTX-220ENST00000476858 BMP6P22004 513 aa13.49□□□□□ -0.25
APTX-220ENST00000476858 ABCD1P33897 745 aa13.49□□□□□ -0.25
APTX-220ENST00000476858 USP41Q3LFD5 358 aa13.49□□□□□ -0.25
APTX-220ENST00000476858 C9orf57Q5W0N0 161 aa13.49□□□□□ -0.25
APTX-220ENST00000476858 PTCRAQ6ISU1 281 aaPredicted RBP13.49□□□□□ -0.25
APTX-220ENST00000476858 ANKRD54Q6NXT1 300 aa13.49□□□□□ -0.25
APTX-220ENST00000476858 ATXN2LQ8WWM7 1075 aaKnown RBP13.49□□□□□ -0.25
APTX-220ENST00000476858 ZNF516Q92618 1163 aa13.49□□□□□ -0.25
APTX-220ENST00000476858 FBXL18Q96ME1 805 aa13.49□□□□□ -0.25
APTX-220ENST00000476858 UROC1Q96N76 676 aa13.49□□□□□ -0.25
APTX-220ENST00000476858 TTPALQ9BTX7 342 aa13.49□□□□□ -0.25
APTX-220ENST00000476858 MRPL17Q9NRX2 175 aaKnown RBP13.49□□□□□ -0.25
APTX-220ENST00000476858 SLC38A7Q9NVC3 462 aa13.49□□□□□ -0.25
APTX-220ENST00000476858 SIX4Q9UIU6 781 aa13.49□□□□□ -0.25
APTX-220ENST00000476858 UBQLN1Q9UMX0 589 aaKnown RBP13.49□□□□□ -0.25
APTX-220ENST00000476858 UBE4BO95155 1302 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 SCN1AP35498 2009 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 ANO9A1A5B4 782 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 PIRO00625 290 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 MBTPS2O43462 519 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 KLRC2P26717 231 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 PMS1P54277 932 aaKnown RBP13.48□□□□□ -0.25
APTX-220ENST00000476858 KCNB1Q14721 858 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 PSMD5Q16401 504 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 IER5LQ5T953 404 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 TMEM184AQ6ZMB5 413 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 C1orf127Q8N9H9 656 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 SPATA20Q8TB22 786 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 PIK3R5Q8WYR1 880 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 EEF2KMTQ96G04 330 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 BORCS6Q96GS4 357 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 MTMR12Q9C0I1 747 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 DMAC2Q9NW81 257 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 DPP3Q9NY33 737 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 CD207Q9UJ71 328 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 MAN1B1Q9UKM7 699 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 TSC2P49815 1807 aa13.48□□□□□ -0.25
APTX-220ENST00000476858 BIN1O00499 593 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 TGM5O43548 720 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 RFPL2O75678 378 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 MYL1P05976 194 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 CYP3A5P20815 502 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 RPL9P32969 192 aaKnown RBP13.47□□□□□ -0.25
APTX-220ENST00000476858 MCM4P33991 863 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 PRCPP42785 496 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 AARSP49588 968 aaKnown RBP eCLIP13.47□□□□□ -0.25
APTX-220ENST00000476858 DLG4P78352 724 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 TFAMQ00059 246 aaKnown RBP13.47□□□□□ -0.25
APTX-220ENST00000476858 PSMD2Q13200 908 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 SNRNP35Q16560 246 aaKnown RBP13.47□□□□□ -0.25
APTX-220ENST00000476858 CAMK4Q16566 473 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 KYAT1Q16773 422 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 ZCWPW2Q504Y3 356 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 TJAP1Q5JTD0 557 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 VARS2Q5ST30 1063 aaKnown RBP13.47□□□□□ -0.25
APTX-220ENST00000476858 RARS2Q5T160 578 aaKnown RBP13.47□□□□□ -0.25
APTX-220ENST00000476858 KIAA1841Q6NSI8 718 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 LILRA6Q6PI73 481 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.47□□□□□ -0.25
APTX-220ENST00000476858 STXBP4Q6ZWJ1 553 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 SMRP1Q8NCR6 262 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 ADAMTS19Q8TE59 1207 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 KHSRPQ92945 711 aaKnown RBP eCLIP13.47□□□□□ -0.256e-6■□□□□ 9.5
APTX-220ENST00000476858 SUSD3Q96L08 255 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 TIGD1Q96MW7 591 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 TMEM209Q96SK2 561 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 CDCA3Q99618 268 aaPredicted RBP13.47□□□□□ -0.25
APTX-220ENST00000476858 ASB7Q9H672 318 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 LMBRD1Q9NUN5 540 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 C2CD2Q9Y426 696 aa13.47□□□□□ -0.25
APTX-220ENST00000476858 USP15Q9Y4E8 981 aaPredicted RBP13.47□□□□□ -0.25
APTX-220ENST00000476858 TRIM49BA6NDI0 452 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 HCRTO43612 131 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 TBC1D4O60343 1298 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 IL18RAPO95256 599 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 VNN2O95498 520 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 ITGB3P05106 788 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 OR4Q2P0C623 313 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 POLR2BP30876 1174 aaKnown RBP13.46□□□□□ -0.25
APTX-220ENST00000476858 OR1D2P34982 312 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 LILRA4P59901 499 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 CYP24A1Q07973 514 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 MRPL58Q14197 206 aaKnown RBP13.46□□□□□ -0.25
APTX-220ENST00000476858 CCDC142Q17RM4 750 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 C1orf220Q5T0J3 134 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 TMC5Q6UXY8 1006 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 CLEC17AQ6ZS10 378 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 C12orf56Q8IXR9 622 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 XXYLT1Q8NBI6 393 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 BEST2Q8NFU1 509 aa13.46□□□□□ -0.25
APTX-220ENST00000476858 CCDC127Q96BQ5 260 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms