RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 RDH13Q8NBN7 331 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 SLC22A17Q8WUG5 538 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 PIK3R5Q8WYR1 880 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 APOL5Q9BWW9 433 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 RXFP1Q9HBX9 757 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 KIAA1586Q9HCI6 787 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 TSHZ2Q9NRE2 1034 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 RMND1Q9NWS8 449 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 DPP3Q9NY33 737 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 MAPK8IP1Q9UQF2 711 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 FAM50BQ9Y247 325 aa16.29■□□□□ 0.2
DFFA-203ENST00000476658 GRXCR2A6NFK2 248 aa16.28■□□□□ 0.2
DFFA-203ENST00000476658 PPEF2O14830 753 aa16.28■□□□□ 0.2
DFFA-203ENST00000476658 PRPF40AO75400 957 aaKnown RBP16.28■□□□□ 0.2
DFFA-203ENST00000476658 SMC2O95347 1197 aa16.28■□□□□ 0.2
DFFA-203ENST00000476658 FGFR3P22607 806 aa16.28■□□□□ 0.2
DFFA-203ENST00000476658 CLCN4P51793 760 aa16.28■□□□□ 0.2
DFFA-203ENST00000476658 UBE2HP62256 183 aa16.28■□□□□ 0.2
DFFA-203ENST00000476658 SMAD4Q13485 552 aaKnown RBP16.28■□□□□ 0.2
DFFA-203ENST00000476658 SNRNP35Q16560 246 aaKnown RBP16.28■□□□□ 0.2
DFFA-203ENST00000476658 C9orf57Q5W0N0 161 aa16.28■□□□□ 0.2
DFFA-203ENST00000476658 PALB2Q86YC2 1186 aa16.28■□□□□ 0.2
DFFA-203ENST00000476658 NT5DC4Q86YG4 428 aa16.28■□□□□ 0.2
DFFA-203ENST00000476658 LNX1Q8TBB1 728 aaPredicted RBP16.28■□□□□ 0.2
DFFA-203ENST00000476658 ERCC4Q92889 916 aaPredicted RBP16.28■□□□□ 0.2
DFFA-203ENST00000476658 SMARCE1Q969G3 411 aa16.28■□□□□ 0.2
DFFA-203ENST00000476658 PDE11AQ9HCR9 933 aa16.28■□□□□ 0.2
DFFA-203ENST00000476658 FNIP2Q9P278 1114 aa16.28■□□□□ 0.2
DFFA-203ENST00000476658 NCOR1O75376 2440 aa16.27■□□□□ 0.2
DFFA-203ENST00000476658 SYN3O14994 580 aa16.27■□□□□ 0.2
DFFA-203ENST00000476658 MBTPS2O43462 519 aa16.27■□□□□ 0.2
DFFA-203ENST00000476658 EXOC3O60645 756 aa16.27■□□□□ 0.2
DFFA-203ENST00000476658 GLUD1P00367 558 aa16.27■□□□□ 0.2
DFFA-203ENST00000476658 IL9P15248 144 aa16.27■□□□□ 0.2
DFFA-203ENST00000476658 HOXB8P17481 243 aaPredicted RBP16.27■□□□□ 0.2
DFFA-203ENST00000476658 SURF1Q15526 300 aa16.27■□□□□ 0.2
DFFA-203ENST00000476658 DSTYKQ6XUX3 929 aa16.27■□□□□ 0.2
DFFA-203ENST00000476658 C12orf56Q8IXR9 622 aa16.27■□□□□ 0.2
DFFA-203ENST00000476658 SMRP1Q8NCR6 262 aa16.27■□□□□ 0.2
DFFA-203ENST00000476658 ADAMTS19Q8TE59 1207 aa16.27■□□□□ 0.2
DFFA-203ENST00000476658 CACTINQ8WUQ7 758 aaKnown RBP16.27■□□□□ 0.2
DFFA-203ENST00000476658 SUSD3Q96L08 255 aa16.27■□□□□ 0.2
DFFA-203ENST00000476658 FBXL18Q96ME1 805 aa16.27■□□□□ 0.2
DFFA-203ENST00000476658 DZANK1Q9NVP4 752 aa16.27■□□□□ 0.2
DFFA-203ENST00000476658 PDXKO00764 312 aa16.26■□□□□ 0.19
DFFA-203ENST00000476658 CALUO43852 315 aaPredicted RBP16.26■□□□□ 0.19
DFFA-203ENST00000476658 TMEM191BP0C7N4 346 aa16.26■□□□□ 0.19
DFFA-203ENST00000476658 VARS2Q5ST30 1063 aaKnown RBP16.26■□□□□ 0.19
DFFA-203ENST00000476658 LMBRD2Q68DH5 695 aaPredicted RBP16.26■□□□□ 0.19
DFFA-203ENST00000476658 SYCE2Q6PIF2 218 aa16.26■□□□□ 0.19
DFFA-203ENST00000476658 ELMSAN1Q6PJG2 1045 aa16.26■□□□□ 0.19
DFFA-203ENST00000476658 ANKS3Q6ZW76 656 aa16.26■□□□□ 0.19
DFFA-203ENST00000476658 SMYD4Q8IYR2 804 aaPredicted RBP16.26■□□□□ 0.19
DFFA-203ENST00000476658 APPL2Q8NEU8 664 aa16.26■□□□□ 0.19
DFFA-203ENST00000476658 GSDMAQ96QA5 445 aa16.26■□□□□ 0.19
DFFA-203ENST00000476658 CLSTN3Q9BQT9 956 aa16.26■□□□□ 0.19
DFFA-203ENST00000476658 KCTD10Q9H3F6 313 aa16.26■□□□□ 0.19
DFFA-203ENST00000476658 MAN1C1Q9NR34 630 aa16.26■□□□□ 0.19
DFFA-203ENST00000476658 MTRRQ9UBK8 725 aa16.26■□□□□ 0.19
DFFA-203ENST00000476658 PCDHA5Q9Y5H7 936 aa16.26■□□□□ 0.19
DFFA-203ENST00000476658 ANO9A1A5B4 782 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 PIRO00625 290 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 TGM5O43548 720 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 NR3C1P04150 777 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 SPATA31D3P0C874 917 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 OR1D2P34982 312 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 LILRA4P59901 499 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 RARS2Q5T160 578 aaKnown RBP16.25■□□□□ 0.19
DFFA-203ENST00000476658 CES5AQ6NT32 575 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 SPATA31D4Q6ZUB0 917 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 ELOA2Q8IYF1 753 aaPredicted RBP16.25■□□□□ 0.19
DFFA-203ENST00000476658 GUF1Q8N442 669 aaKnown RBP16.25■□□□□ 0.19
DFFA-203ENST00000476658 C12orf76Q8N812 135 aaPredicted RBP16.25■□□□□ 0.19
DFFA-203ENST00000476658 CCDC127Q96BQ5 260 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 ANKRD36BP1Q96IX9 119 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 FAM84AQ96KN4 292 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 NECAB3Q96P71 396 aaPredicted RBP16.25■□□□□ 0.19
DFFA-203ENST00000476658 FNBP1Q96RU3 617 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 UHRF1Q96T88 793 aaPredicted RBP16.25■□□□□ 0.19
DFFA-203ENST00000476658 COL25A1Q9BXS0 654 aaPredicted RBP16.25■□□□□ 0.19
DFFA-203ENST00000476658 MTMR12Q9C0I1 747 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 DPP7Q9UHL4 492 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 PCDHB8Q9UN66 801 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 USP15Q9Y4E8 981 aaPredicted RBP16.25■□□□□ 0.19
DFFA-203ENST00000476658 CDY1Q9Y6F8 540 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 C2orf16Q68DN1 1984 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 C5orf42Q9H799 3197 aa16.25■□□□□ 0.19
DFFA-203ENST00000476658 TSC2P49815 1807 aa16.24■□□□□ 0.19
DFFA-203ENST00000476658 TTC28Q96AY4 2481 aa16.24■□□□□ 0.19
DFFA-203ENST00000476658 H7C4K7 107 aa16.24■□□□□ 0.19
DFFA-203ENST00000476658 M0QZQ0 153 aa16.24■□□□□ 0.19
DFFA-203ENST00000476658 ADAM12O43184 909 aa16.24■□□□□ 0.19
DFFA-203ENST00000476658 TNNC2P02585 160 aa16.24■□□□□ 0.19
DFFA-203ENST00000476658 ITGB3P05106 788 aa16.24■□□□□ 0.19
DFFA-203ENST00000476658 KRT19P08727 400 aa16.24■□□□□ 0.19
DFFA-203ENST00000476658 DLATP10515 647 aaKnown RBP16.24■□□□□ 0.19
DFFA-203ENST00000476658 TNNI1P19237 187 aa16.24■□□□□ 0.19
DFFA-203ENST00000476658 POLR2BP30876 1174 aaKnown RBP16.24■□□□□ 0.19
DFFA-203ENST00000476658 AARSP49588 968 aaKnown RBP eCLIP16.24■□□□□ 0.19
DFFA-203ENST00000476658 TAF6P49848 677 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms