RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 OLR1P78380 273 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 MYL5Q02045 173 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 CHRNEQ04844 493 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 MTF1Q14872 753 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 GRIN2CQ14957 1233 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 UBE3CQ15386 1083 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 SWI5Q1ZZU3 235 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.38□□□□□ -1.71
CD55-208ENST00000476590 KCTD21Q4G0X4 260 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 TRAPPC3LQ5T215 181 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ERMARDQ5T6L9 678 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 TSHZ3Q63HK5 1081 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 HAUS3Q68CZ6 603 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 RAD9BQ6WBX8 426 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 DTHD1Q6ZMT9 781 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 DBX2Q6ZNG2 339 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 SIRT2Q8IXJ6 389 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 FAM9CQ8IZT9 166 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 KIF2BQ8N4N8 673 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 CPSF7Q8N684 471 aaKnown RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 RNF169Q8NCN4 708 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 GIMAP8Q8ND71 665 aaPredicted RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 MDM1Q8TC05 714 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 SLC22A8Q8TCC7 542 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 NRBF2Q96F24 287 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 METTL2AQ96IZ6 378 aaKnown RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 SERINC2Q96SA4 455 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 COQ7Q99807 217 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 CCDC77Q9BR77 488 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 IMPG2Q9BZV3 1241 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 OSBPL3Q9H4L5 887 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 LGR6Q9HBX8 967 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 EMC3Q9P0I2 261 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ZBTB21Q9ULJ3 1066 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 SPEF1Q9Y4P9 236 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ANGPTL3Q9Y5C1 460 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 MAGI2Q86UL8 1455 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ARHGEF5Q12774 1597 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 A0A087WWV3 80 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ARHGAP10A1A4S6 786 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 CDC14CA4D256 554 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 INO80B-WBP1J3KQ70 363 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 O00370 1275 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 NDC80O14777 642 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 MCF2LO15068 1137 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ALOX15BO15296 676 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 HDAC3O15379 428 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 KCNQ2O43526 872 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 DKC1O60832 514 aaKnown RBP eCLIP4.38□□□□□ -1.71
CD55-208ENST00000476590 IGHA2P01877 340 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 RPN1P04843 607 aaKnown RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 PIM1P11309 404 aaPredicted RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 IDEP14735 1019 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 PPM1FP49593 454 aaPredicted RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 VPS41P49754 854 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 HNRNPMP52272 730 aaKnown RBP eCLIP4.38□□□□□ -1.711e-6■■■■□ 22.2
CD55-208ENST00000476590 HNRNPFP52597 415 aaKnown RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 RCAN1P53805 252 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 NOP14P78316 857 aaKnown RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 COG7P83436 770 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 CD83Q01151 205 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 EN1Q05925 392 aaPredicted RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 AP1B1Q10567 949 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 SMARCB1Q12824 385 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 KCNJ8Q15842 424 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ALFQ53S48 1182 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 TNNI3KQ59H18 835 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 PRSS36Q5K4E3 855 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 TMEM63BQ5T3F8 832 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 PRPF38BQ5VTL8 546 aaKnown RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 FCRLBQ6BAA4 426 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 METTL2BQ6P1Q9 378 aaKnown RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 USP43Q70EL4 1123 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ILDR2Q71H61 639 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ZNF572Q7Z3I7 529 aaPredicted RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 MIER3Q7Z3K6 550 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 LRRTM3Q86VH5 581 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 NME9Q86XW9 330 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 CPXCR1Q8N123 301 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ATP6V0D2Q8N8Y2 350 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 TTLL11Q8NHH1 800 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 PIP4K2CQ8TBX8 421 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 CCDC51Q96ER9 411 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 DYDC2Q96IM9 177 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 CEP19Q96LK0 163 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ZNF317Q96PQ6 595 aaPredicted RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 TMEM237Q96Q45 408 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 VPS35Q96QK1 796 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ZNF184Q99676 751 aaPredicted RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 TSG101Q99816 390 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 EIF2AK1Q9BQI3 630 aaKnown RBP4.38□□□□□ -1.71
CD55-208ENST00000476590 SDF4Q9BRK5 362 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 TTPALQ9BTX7 342 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 NUP85Q9BW27 656 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 RBCK1Q9BYM8 510 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 ZNF700Q9H0M5 742 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 HSD3B7Q9H2F3 369 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 DPH5Q9H2P9 285 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 RUBCNLQ9H714 662 aa4.38□□□□□ -1.71
CD55-208ENST00000476590 WASH6PQ9NQA3 447 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms