RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 CYP2J2P51589 502 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 NEK3P51956 506 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 FMO1Q01740 532 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 DSTYKQ6XUX3 929 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 TPH2Q8IWU9 490 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 MYCT1Q8N699 235 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 TEKT1Q969V4 418 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 TGS1Q96RS0 853 aaKnown RBP8.91□□□□□ -0.98
VAPB-205ENST00000476395 MMADHCQ9H3L0 296 aaPredicted RBP8.91□□□□□ -0.98
VAPB-205ENST00000476395 DBNDD1Q9H9R9 158 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 PARVGQ9HBI0 331 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.91□□□□□ -0.98
VAPB-205ENST00000476395 GALNT8Q9NY28 637 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 EURLQ9NYK6 297 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 UBE4BO95155 1302 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 TMEM150BA6NC51 233 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 KRT36O76013 467 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 GJB6O95452 261 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 VIL1P09327 827 aaKnown RBP8.91□□□□□ -0.98
VAPB-205ENST00000476395 GAP43P17677 238 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 CHKAP35790 457 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 KCNJ1P48048 391 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 CACNA2D1P54289 1103 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 PSMC1P62191 440 aaKnown RBP8.91□□□□□ -0.98
VAPB-205ENST00000476395 TEX9Q8N6V9 391 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 C12orf50Q8NA57 414 aaPredicted RBP8.91□□□□□ -0.98
VAPB-205ENST00000476395 ACER1Q8TDN7 264 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 ZFAND2BQ8WV99 257 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 PLEKHG4BQ96PX9 1271 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 PRKAG3Q9UGI9 489 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 CHKBQ9Y259 395 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 ARL2BPQ9Y2Y0 163 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 RLFQ13129 1914 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 ZNF536O15090 1300 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 SIGLEC16A6NMB1 481 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 RASGRF2O14827 1237 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 CHMP2AO43633 222 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 FTLP02792 175 aaPredicted RBP8.91□□□□□ -0.98
VAPB-205ENST00000476395 T-ENOLP0DO92 83 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 CCNB1P14635 433 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 MCL1Q07820 350 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 DHX34Q14147 1143 aaKnown RBP8.91□□□□□ -0.98
VAPB-205ENST00000476395 ARHGAP44Q17R89 818 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 SLC47A2Q86VL8 602 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 FAM71AQ8IYT1 594 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 IL31RAQ8NI17 732 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 ARHGEF2Q92974 986 aaKnown RBP8.91□□□□□ -0.98
VAPB-205ENST00000476395 SLC7A6OSQ96CW6 309 aaPredicted RBP8.91□□□□□ -0.98
VAPB-205ENST00000476395 FAM84AQ96KN4 292 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 MRIQ9BWK5 157 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 TRIM7Q9C029 511 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 NSRP1Q9H0G5 558 aaKnown RBP8.91□□□□□ -0.98
VAPB-205ENST00000476395 IRF2BPLQ9H1B7 796 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 ETNK2Q9NVF9 386 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 PI4KBQ9UBF8 816 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 GABBR1Q9UBS5 961 aa8.91□□□□□ -0.98
VAPB-205ENST00000476395 DIS3Q9Y2L1 958 aaKnown RBP8.91□□□□□ -0.98
VAPB-205ENST00000476395 EMSYQ7Z589 1322 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 FAM187AA6NFU0 413 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 O00370 1275 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 ITGBL1O95965 494 aaPredicted RBP8.9□□□□□ -0.98
VAPB-205ENST00000476395 GH2P01242 217 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 RPL13P26373 211 aaKnown RBP8.9□□□□□ -0.98
VAPB-205ENST00000476395 MAMSTRQ6ZN01 415 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 TMEM179Q6ZVK1 233 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 VSIG1Q86XK7 387 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 ERMNQ8TAM6 284 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 ZNF333Q96JL9 665 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 IFT74Q96LB3 600 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 TRAIPQ9BWF2 469 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 IQCGQ9H095 443 aaKnown RBP8.9□□□□□ -0.98
VAPB-205ENST00000476395 TSPYL2Q9H2G4 693 aaPredicted RBP8.9□□□□□ -0.98
VAPB-205ENST00000476395 CNOT7Q9UIV1 285 aaKnown RBP8.9□□□□□ -0.98
VAPB-205ENST00000476395 DAAM1Q9Y4D1 1078 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 CCDC169A6NNP5 214 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 GBP1P32455 592 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 BPIFB4P59827 614 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 MYL7Q01449 175 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 DNAJC3Q13217 504 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 LBRQ14739 615 aaKnown RBP8.9□□□□□ -0.98
VAPB-205ENST00000476395 SCARA3Q6AZY7 606 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 MFSD5Q6N075 450 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 RDH13Q8NBN7 331 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 HELQQ8TDG4 1101 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 SCG3Q8WXD2 468 aaKnown RBP8.9□□□□□ -0.98
VAPB-205ENST00000476395 DNAJC1Q96KC8 554 aaKnown RBP8.9□□□□□ -0.98
VAPB-205ENST00000476395 MIPEPQ99797 713 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 YIPF2Q9BWQ6 316 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 TMEM117Q9H0C3 514 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 SUN2Q9UH99 717 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 BLOC1S6Q9UL45 172 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 PCDHGA4Q9Y5G9 962 aa8.9□□□□□ -0.98
VAPB-205ENST00000476395 MGAMO43451 1857 aa8.9□□□□□ -0.99
VAPB-205ENST00000476395 HNRNPRO43390 633 aaKnown RBP8.89□□□□□ -0.99
VAPB-205ENST00000476395 FOSP01100 380 aaPredicted RBP8.89□□□□□ -0.99
VAPB-205ENST00000476395 CYP1A2P05177 515 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 BMP3P12645 472 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 MAGEA8P43361 318 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 PRELPP51888 382 aa8.89□□□□□ -0.99
VAPB-205ENST00000476395 EIF3BP55884 814 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms