RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 GGPS1O95749 300 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 HPXP02790 462 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 HMGB1P09429 215 aaKnown RBP4.76□□□□□ -1.65
VPS13D-206ENST00000476045 IQCF3P0C7M6 154 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 ZNF286BP0CG31 522 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 CYP2C9P11712 490 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 SYT1P21579 422 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 EIF4A3P38919 411 aaKnown RBP4.76□□□□□ -1.65
VPS13D-206ENST00000476045 WDR5P61964 334 aaKnown RBP4.76□□□□□ -1.65
VPS13D-206ENST00000476045 MRPS5P82675 430 aaKnown RBP4.76□□□□□ -1.65
VPS13D-206ENST00000476045 RBM10P98175 930 aaKnown RBP4.76□□□□□ -1.65
VPS13D-206ENST00000476045 FAM160A1Q05DH4 1040 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 ST3GAL1Q11201 340 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 KCNMB1Q16558 191 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 LY6KQ17RY6 165 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 TIGD5Q53EQ6 642 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 NAALADL2Q58DX5 795 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 CELF3Q5SZQ8 465 aaKnown RBP4.76□□□□□ -1.65
VPS13D-206ENST00000476045 CCDC183Q5T5S1 534 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 CDCP2Q5VXM1 449 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 CREB3L3Q68CJ9 461 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 MCTP2Q6DN12 878 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 TAF2Q6P1X5 1199 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 CYB5R4Q7L1T6 521 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 RSPH3Q86UC2 560 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 NLRX1Q86UT6 975 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 SGMS1Q86VZ5 419 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 HERC6Q8IVU3 1022 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 REXO1Q8N1G1 1221 aaKnown RBP4.76□□□□□ -1.65
VPS13D-206ENST00000476045 FBXO27Q8NI29 283 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 SMARCC2Q8TAQ2 1214 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 KAT2BQ92831 832 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 COPS5Q92905 334 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 MAP4K1Q92918 833 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 GPRASP2Q96D09 838 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 PDLIM2Q96JY6 352 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 ZSCAN31Q96LW9 406 aaPredicted RBP4.76□□□□□ -1.65
VPS13D-206ENST00000476045 CCDC74BQ96LY2 380 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 TCEANC2Q96MN5 208 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 KREMEN1Q96MU8 473 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 TAAR1Q96RJ0 339 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 FTOQ9C0B1 505 aaKnown RBP eCLIP4.76□□□□□ -1.65
VPS13D-206ENST00000476045 NKX2-4Q9H2Z4 354 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 PRDM12Q9H4Q4 367 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 LY9Q9HBG7 655 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 RBM28Q9NW13 759 aaKnown RBP4.76□□□□□ -1.65
VPS13D-206ENST00000476045 COL20A1Q9P218 1284 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 ADAMTS1Q9UHI8 967 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 TMEM59LQ9UK28 342 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 MTMR6Q9Y217 621 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 YBX2Q9Y2T7 364 aaKnown RBP4.76□□□□□ -1.65
VPS13D-206ENST00000476045 RWDD3Q9Y3V2 267 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 CYP46A1Q9Y6A2 500 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 ZNF318Q5VUA4 2279 aa4.76□□□□□ -1.65
VPS13D-206ENST00000476045 TCF20Q9UGU0 1960 aaKnown RBP4.76□□□□□ -1.65
VPS13D-206ENST00000476045 NRCAMQ92823 1304 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 C17orf102A2RUQ5 167 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 CHURC1-FNTBB4DL54 471 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 SH2B2O14492 632 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 MAFGO15525 162 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 PRC1O43663 620 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 PPP1R11O60927 126 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 UBOX5O94941 541 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 GJB5O95377 273 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 FOSP01100 380 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 AMHP03971 560 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 LGALS2P05162 132 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 CA3P07451 260 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 CKBP12277 381 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 MYCLP12524 364 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 ERCC5P28715 1186 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 SLC26A2P50443 739 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 SETQ01105 290 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 STK3Q13188 491 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 HSP90AA2PQ14568 343 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 SF3A1Q15459 793 aaKnown RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 ME3Q16798 604 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 TRIM71Q2Q1W2 868 aaKnown RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 HS1BP3Q53T59 392 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 SYNE3Q6ZMZ3 975 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 TMTC3Q6ZXV5 915 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 HS2ST1Q7LGA3 356 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 CHST3Q7LGC8 479 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 DEFB128Q7Z7B8 93 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 RPAINQ86UA6 219 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 FAM177A1Q8N128 213 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 CCDC12Q8WUD4 166 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 SEPT8Q92599 483 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 DHX38Q92620 1227 aaKnown RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 KIRREL1Q96J84 757 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 ZNF830Q96NB3 372 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 TGS1Q96RS0 853 aaKnown RBP4.75□□□□□ -1.65
VPS13D-206ENST00000476045 CTAGE1Q96RT6 745 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 PIGSQ96S52 555 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 RAD9AQ99638 391 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 CPVLQ9H3G5 476 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 MLXIPQ9HAP2 919 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 GMIPQ9P107 970 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 HDAC6Q9UBN7 1215 aa4.75□□□□□ -1.65
VPS13D-206ENST00000476045 USP25Q9UHP3 1055 aa4.75□□□□□ -1.65
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