RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 MRPL9Q9BYD2 267 aaKnown RBP13.8□□□□□ -0.2
HLA-F-224ENST00000475996 RC3H2Q9HBD1 1191 aaKnown RBP13.8□□□□□ -0.2
HLA-F-224ENST00000475996 DNAJB4Q9UDY4 337 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 COQ4Q9Y3A0 265 aa13.8□□□□□ -0.2
HLA-F-224ENST00000475996 R3HCC1Q9Y3T6 440 aaKnown RBP13.8□□□□□ -0.2
HLA-F-224ENST00000475996 RANBP2P49792 3224 aaKnown RBP13.79□□□□□ -0.2
HLA-F-224ENST00000475996 GTPBP10A4D1E9 387 aaKnown RBP13.79□□□□□ -0.2
HLA-F-224ENST00000475996 PODXLO00592 558 aa13.79□□□□□ -0.2
HLA-F-224ENST00000475996 PMM2O15305 246 aa13.79□□□□□ -0.2
HLA-F-224ENST00000475996 IGFBP6P24592 240 aaPredicted RBP13.79□□□□□ -0.2
HLA-F-224ENST00000475996 LRPAP1P30533 357 aa13.79□□□□□ -0.2
HLA-F-224ENST00000475996 OR1G1P47890 313 aa13.79□□□□□ -0.2
HLA-F-224ENST00000475996 CLCNKBP51801 687 aa13.79□□□□□ -0.2
HLA-F-224ENST00000475996 RBP5P82980 135 aa13.79□□□□□ -0.2
HLA-F-224ENST00000475996 BTG3Q14201 252 aaPredicted RBP13.79□□□□□ -0.2
HLA-F-224ENST00000475996 SPOUT1Q5T280 376 aaKnown RBP13.79□□□□□ -0.2
HLA-F-224ENST00000475996 COLGALT2Q8IYK4 626 aa13.79□□□□□ -0.2
HLA-F-224ENST00000475996 LRRC43Q8N309 656 aa13.79□□□□□ -0.2
HLA-F-224ENST00000475996 EHBP1Q8NDI1 1231 aa13.79□□□□□ -0.2
HLA-F-224ENST00000475996 LMO3Q8TAP4 145 aa13.79□□□□□ -0.2
HLA-F-224ENST00000475996 ERGIC2Q96RQ1 377 aa13.79□□□□□ -0.2
HLA-F-224ENST00000475996 SIK3Q9Y2K2 1263 aa13.79□□□□□ -0.2
HLA-F-224ENST00000475996 ANO9A1A5B4 782 aa13.78□□□□□ -0.2
HLA-F-224ENST00000475996 GRXCR1A8MXD5 290 aa13.78□□□□□ -0.2
HLA-F-224ENST00000475996 PON1P27169 355 aa13.78□□□□□ -0.2
HLA-F-224ENST00000475996 PBX1P40424 430 aa13.78□□□□□ -0.2
HLA-F-224ENST00000475996 PBX3P40426 434 aa13.78□□□□□ -0.2
HLA-F-224ENST00000475996 RABGGTBP53611 331 aa13.78□□□□□ -0.2
HLA-F-224ENST00000475996 DSC1Q08554 894 aa13.78□□□□□ -0.2
HLA-F-224ENST00000475996 ZNF699Q32M78 642 aa13.78□□□□□ -0.2
HLA-F-224ENST00000475996 FAM109BQ6ICB4 259 aaPredicted RBP13.78□□□□□ -0.2
HLA-F-224ENST00000475996 CMTR2Q8IYT2 770 aaKnown RBP13.78□□□□□ -0.2
HLA-F-224ENST00000475996 PHOSPHO2Q8TCD6 241 aa13.78□□□□□ -0.2
HLA-F-224ENST00000475996 HASPINQ8TF76 798 aa13.78□□□□□ -0.2
HLA-F-224ENST00000475996 CWH43Q9H720 699 aa13.78□□□□□ -0.2
HLA-F-224ENST00000475996 APOBEC3GQ9HC16 384 aaKnown RBP13.78□□□□□ -0.2
HLA-F-224ENST00000475996 FAM207AQ9NSI2 230 aaPredicted RBP13.78□□□□□ -0.2
HLA-F-224ENST00000475996 PRG3Q9Y2Y8 225 aaPredicted RBP13.78□□□□□ -0.2
HLA-F-224ENST00000475996 NT5C1B-RDH14C9J2C7 533 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 F8W810 466 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 PIRO00625 290 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 TLL1O43897 1013 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 SLC11A1P49279 550 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 NOP14P78316 857 aaKnown RBP13.77□□□□□ -0.21
HLA-F-224ENST00000475996 HTRA4P83105 476 aaPredicted RBP13.77□□□□□ -0.21
HLA-F-224ENST00000475996 UPP1Q16831 310 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 WDR44Q5JSH3 913 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 GJB7Q6PEY0 223 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 TRIM65Q6PJ69 517 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 SCARA5Q6ZMJ2 495 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 TMC6Q7Z403 805 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 ARHGEF19Q8IW93 802 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 C3orf58Q8NDZ4 430 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 RSPH1Q8WYR4 309 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 TATDN2Q93075 761 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 HPDLQ96IR7 371 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 RAD9AQ99638 391 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 IMPG2Q9BZV3 1241 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 XYLT2Q9H1B5 865 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 SIX2Q9NPC8 291 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 INSL6Q9Y581 213 aa13.77□□□□□ -0.21
HLA-F-224ENST00000475996 MRPL42Q9Y6G3 142 aaKnown RBP13.77□□□□□ -0.21
HLA-F-224ENST00000475996 GBF1Q92538 1859 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 A0A1W2PQC6 194 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 LCHNA4D1U4 455 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 NRP1O14786 923 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 EPHB6O15197 1021 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 ASS1P00966 412 aaKnown RBP13.76□□□□□ -0.21
HLA-F-224ENST00000475996 RPL9P32969 192 aaKnown RBP13.76□□□□□ -0.21
HLA-F-224ENST00000475996 MLLT1Q03111 559 aaPredicted RBP13.76□□□□□ -0.21
HLA-F-224ENST00000475996 SGSM1Q2NKQ1 1148 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 VSTM4Q8IW00 320 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 LRRC52Q8N7C0 313 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 CCDC150Q8NCX0 1101 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 NEK11Q8NG66 645 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 DDX27Q96GQ7 796 aaKnown RBP13.76□□□□□ -0.21
HLA-F-224ENST00000475996 MRFAP1L1Q96HT8 127 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 ZNF560Q96MR9 790 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 UROC1Q96N76 676 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 NT5C1BQ96P26 610 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 NXF1Q9UBU9 619 aaKnown RBP13.76□□□□□ -0.21
HLA-F-224ENST00000475996 POLIQ9UNA4 740 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 FAN1Q9Y2M0 1017 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 NUB1Q9Y5A7 615 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.76□□□□□ -0.21
HLA-F-224ENST00000475996 KIAA1671Q9BY89 1806 aa13.76□□□□□ -0.21
HLA-F-224ENST00000475996 SPTLC1O15269 473 aa13.75□□□□□ -0.21
HLA-F-224ENST00000475996 B3GAT3O94766 335 aa13.75□□□□□ -0.21
HLA-F-224ENST00000475996 NOL4O94818 638 aa13.75□□□□□ -0.21
HLA-F-224ENST00000475996 KIF4AO95239 1232 aa13.75□□□□□ -0.21
HLA-F-224ENST00000475996 ITGB1P05556 798 aa13.75□□□□□ -0.21
HLA-F-224ENST00000475996 GALTP07902 379 aa13.75□□□□□ -0.21
HLA-F-224ENST00000475996 MYOGP15173 224 aa13.75□□□□□ -0.21
HLA-F-224ENST00000475996 ATICP31939 592 aa13.75□□□□□ -0.21
HLA-F-224ENST00000475996 TAF6P49848 677 aa13.75□□□□□ -0.21
HLA-F-224ENST00000475996 BCAR1P56945 870 aa13.75□□□□□ -0.21
HLA-F-224ENST00000475996 MYO1EQ12965 1108 aa13.75□□□□□ -0.21
HLA-F-224ENST00000475996 ZNF667Q5HYK9 610 aa13.75□□□□□ -0.21
HLA-F-224ENST00000475996 KLHDC7AQ5VTJ3 777 aa13.75□□□□□ -0.21
HLA-F-224ENST00000475996 PHLDB3Q6NSJ2 640 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms