RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 C18orf25Q96B23 403 aaPredicted RBP11.84□□□□□ -0.51
CDRT1-205ENST00000475944 ZNF512Q96ME7 567 aaPredicted RBP11.84□□□□□ -0.51
CDRT1-205ENST00000475944 NTPCRQ9BSD7 190 aaKnown RBP11.84□□□□□ -0.51
CDRT1-205ENST00000475944 RUSC1Q9BVN2 902 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 TRMT61BQ9BVS5 477 aaKnown RBP11.84□□□□□ -0.51
CDRT1-205ENST00000475944 ZSCAN32Q9NX65 697 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 PPP4R2Q9NY27 417 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 ANKFY1Q9P2R3 1169 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 AFF4Q9UHB7 1163 aaKnown RBP11.84□□□□□ -0.51
CDRT1-205ENST00000475944 PCDHB6Q9Y5E3 794 aa11.84□□□□□ -0.51
CDRT1-205ENST00000475944 DCHS1Q96JQ0 3298 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 PP2D1A8MPX8 630 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 SLC16A4O15374 487 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 TOM1L1O75674 476 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 SEC24AO95486 1093 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 CPB1P15086 417 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 FCARP24071 287 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 GUCY2CP25092 1073 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 MARCKSP29966 332 aaPredicted RBP11.83□□□□□ -0.52
CDRT1-205ENST00000475944 SMTNP53814 917 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 GRM2Q14416 872 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 PPP2R5DQ14738 602 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 FAM78AQ5JUQ0 283 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 KCTD17Q8N5Z5 321 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 SPIRE2Q8WWL2 714 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 DDX12PQ92771 950 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 IRF7Q92985 503 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 TCEAL4Q96EI5 215 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 TBC1D32Q96NH3 1257 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 ASB16Q96NS5 453 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 IER2Q9BTL4 223 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 OXCT2Q9BYC2 517 aaPredicted RBP11.83□□□□□ -0.52
CDRT1-205ENST00000475944 FAM126AQ9BYI3 521 aaPredicted RBP11.83□□□□□ -0.52
CDRT1-205ENST00000475944 TRPV5Q9NQA5 729 aa11.83□□□□□ -0.52
CDRT1-205ENST00000475944 PRMT8Q9NR22 394 aaPredicted RBP11.83□□□□□ -0.52
CDRT1-205ENST00000475944 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.83□□□□□ -0.52
CDRT1-205ENST00000475944 CITO14578 2027 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 SFI1A8K8P3 1242 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 CLDN3O15551 220 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 PLS3P13797 630 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 PSMC3P17980 439 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 SDHBP21912 280 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 CDC25AP30304 524 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 CCR2P41597 374 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 TOB1P50616 345 aaPredicted RBP11.82□□□□□ -0.52
CDRT1-205ENST00000475944 MCL1Q07820 350 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 TWF1Q12792 350 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 SLC10A6Q3KNW5 377 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 POTEHQ6S545 545 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 ZPBP2Q6X784 338 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 KCNK18Q7Z418 384 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 DEPDC1BQ8WUY9 529 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 NELL1Q92832 810 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 SMARCD2Q92925 531 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 ZBTB45Q96K62 511 aaPredicted RBP11.82□□□□□ -0.52
CDRT1-205ENST00000475944 EPC1Q9H2F5 836 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 PLEKHA5Q9HAU0 1116 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 ASAH2Q9NR71 780 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 DLL3Q9NYJ7 618 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 NDRG2Q9UN36 371 aaKnown RBP11.82□□□□□ -0.52
CDRT1-205ENST00000475944 PCDHB8Q9UN66 801 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 SMG5Q9UPR3 1016 aaKnown RBP11.82□□□□□ -0.52
CDRT1-205ENST00000475944 KIF3AQ9Y496 699 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 CACNA1IQ9P0X4 2223 aa11.82□□□□□ -0.52
CDRT1-205ENST00000475944 MED19A0JLT2 244 aaPredicted RBP11.81□□□□□ -0.52
CDRT1-205ENST00000475944 H0YCG3 227 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 LILRB5O75023 590 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 SEC24BO95487 1268 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 MYL4P12829 197 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 GDI1P31150 447 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 MATR3P43243 847 aaKnown RBP eCLIP11.81□□□□□ -0.52
CDRT1-205ENST00000475944 EPHA5P54756 1037 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 NRLP54845 237 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 YWHAHQ04917 246 aaPredicted RBP11.81□□□□□ -0.52
CDRT1-205ENST00000475944 RAD51AP2Q09MP3 1159 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 MTAPQ13126 283 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 PLD1Q13393 1074 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 FZD5Q13467 585 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 ZRSR1Q15695 479 aaKnown RBP11.81□□□□□ -0.52
CDRT1-205ENST00000475944 IL17AQ16552 155 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 HYIQ5T013 277 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 TSSK4Q6SA08 328 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 VITQ6UXI7 678 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 HS6ST3Q8IZP7 471 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 SYT2Q8N9I0 419 aaPredicted RBP11.81□□□□□ -0.52
CDRT1-205ENST00000475944 TMEM161BQ8NDZ6 487 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 ZSCAN18Q8TBC5 510 aaPredicted RBP11.81□□□□□ -0.52
CDRT1-205ENST00000475944 BICD1Q96G01 975 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 CDK5RAP3Q96JB5 506 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 MMTAG2Q9BU76 263 aaKnown RBP11.81□□□□□ -0.52
CDRT1-205ENST00000475944 GPR88Q9GZN0 384 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 CHRDQ9H2X0 955 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 SLITRK6Q9H5Y7 841 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 TRPV4Q9HBA0 871 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 ZNF334Q9HCZ1 680 aaPredicted RBP11.81□□□□□ -0.52
CDRT1-205ENST00000475944 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.81□□□□□ -0.52
CDRT1-205ENST00000475944 KCND2Q9NZV8 630 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 CEP72Q9P209 647 aa11.81□□□□□ -0.52
CDRT1-205ENST00000475944 LARSQ9P2J5 1176 aaKnown RBP11.81□□□□□ -0.52
CDRT1-205ENST00000475944 TUBGCP4Q9UGJ1 667 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms