RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 A0A0U1RQF3 1178 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 TRIM43BA6NCK2 446 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 KYAT1Q16773 422 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 WDR44Q5JSH3 913 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 APBB1IPQ7Z5R6 666 aaPredicted RBP19.44■□□□□ 0.7
ATG4B-217ENST00000475693 TRIM43Q96BQ3 446 aaPredicted RBP19.44■□□□□ 0.7
ATG4B-217ENST00000475693 VWCEQ96DN2 955 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 CCDC51Q96ER9 411 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 STK33Q9BYT3 514 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 TBX21Q9UL17 535 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 INPP5FQ9Y2H2 1132 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 ARL5CA6NH57 179 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 PITPNM1O00562 1244 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 POMCP01189 267 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 WEE2P0C1S8 567 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 RAP1GAPP47736 663 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 SCNN1GP51170 649 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 ZBTB6Q15916 424 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 MEA1Q16626 185 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 TSR1Q2NL82 804 aaKnown RBP19.44■□□□□ 0.7
ATG4B-217ENST00000475693 ANKLE1Q8NAG6 615 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 ACRBPQ8NEB7 543 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 TOX2Q96NM4 488 aa19.44■□□□□ 0.7
ATG4B-217ENST00000475693 NHEJ1Q9H9Q4 299 aaPredicted RBP19.44■□□□□ 0.7
ATG4B-217ENST00000475693 ASS1P00966 412 aaKnown RBP19.43■□□□□ 0.7
ATG4B-217ENST00000475693 EIF4A3P38919 411 aaKnown RBP19.43■□□□□ 0.7
ATG4B-217ENST00000475693 KCNJ6P48051 423 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 CDH8P55286 799 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 USP38Q8NB14 1042 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 PAAF1Q9BRP4 392 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 HAUS4Q9H6D7 363 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 PLEKHA5Q9HAU0 1116 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 C1orf112Q9NSG2 853 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 LAMA3Q16787 3333 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 EVI5O60447 810 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 CLTBP09497 229 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 FGFR1P11362 822 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 CYP27A1Q02318 531 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 WDR72Q3MJ13 1102 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 TDRD12Q587J7 1177 aaKnown RBP19.43■□□□□ 0.7
ATG4B-217ENST00000475693 PLEKHG4Q58EX7 1191 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 ECHDC2Q86YB7 292 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 EDEM3Q9BZQ6 932 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 RGS18Q9NS28 235 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 C2CD2Q9Y426 696 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 SCN1AP35498 2009 aa19.43■□□□□ 0.7
ATG4B-217ENST00000475693 CYP26A1O43174 497 aa19.42■□□□□ 0.7
ATG4B-217ENST00000475693 TUBB4AP04350 444 aa19.42■□□□□ 0.7
ATG4B-217ENST00000475693 CD58P19256 250 aa19.42■□□□□ 0.7
ATG4B-217ENST00000475693 FECHP22830 423 aa19.42■□□□□ 0.7
ATG4B-217ENST00000475693 SSTR3P32745 418 aaPredicted RBP19.42■□□□□ 0.7
ATG4B-217ENST00000475693 SOX5P35711 763 aa19.42■□□□□ 0.7
ATG4B-217ENST00000475693 GATMP50440 423 aa19.42■□□□□ 0.7
ATG4B-217ENST00000475693 PTPN14Q15678 1187 aa19.42■□□□□ 0.7
ATG4B-217ENST00000475693 ASIC2Q16515 512 aa19.42■□□□□ 0.7
ATG4B-217ENST00000475693 ZNF699Q32M78 642 aa19.42■□□□□ 0.7
ATG4B-217ENST00000475693 C1orf53Q5VUE5 145 aa19.42■□□□□ 0.7
ATG4B-217ENST00000475693 CYP26C1Q6V0L0 522 aa19.42■□□□□ 0.7
ATG4B-217ENST00000475693 SEZ6LQ9BYH1 1024 aa19.42■□□□□ 0.7
ATG4B-217ENST00000475693 ZNHIT6Q9NWK9 470 aaKnown RBP19.42■□□□□ 0.7
ATG4B-217ENST00000475693 FBXL5Q9UKA1 691 aa19.42■□□□□ 0.7
ATG4B-217ENST00000475693 SQORQ9Y6N5 450 aa19.42■□□□□ 0.7
ATG4B-217ENST00000475693 C9IYK1 514 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 ENPP3O14638 875 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 ABL1P00519 1130 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 HNRNPH3P31942 346 aaKnown RBP19.41■□□□□ 0.7
ATG4B-217ENST00000475693 AP3M2P53677 418 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 PTK2Q05397 1052 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 ORC1Q13415 861 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 ZNF394Q53GI3 561 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 XKR4Q5GH76 650 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 ZNF571Q7Z3V5 609 aaPredicted RBP19.41■□□□□ 0.7
ATG4B-217ENST00000475693 MRPL10Q7Z7H8 261 aaKnown RBP19.41■□□□□ 0.7
ATG4B-217ENST00000475693 AIPL1Q9NZN9 384 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 STAT1P42224 750 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 CDR1P51861 262 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 KLHL30Q0D2K2 578 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 CUL2Q13617 745 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 SGSM1Q2NKQ1 1148 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 TMCO2Q7Z6W1 182 aaPredicted RBP19.41■□□□□ 0.7
ATG4B-217ENST00000475693 SLC47A2Q86VL8 602 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 SLC20A1Q8WUM9 679 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 HPDLQ96IR7 371 aa19.41■□□□□ 0.7
ATG4B-217ENST00000475693 ZNF263O14978 683 aa19.4■□□□□ 0.7
ATG4B-217ENST00000475693 ARHGAP6O43182 974 aa19.4■□□□□ 0.7
ATG4B-217ENST00000475693 ZNF623O75123 536 aa19.4■□□□□ 0.7
ATG4B-217ENST00000475693 KRT5P13647 590 aa19.4■□□□□ 0.7
ATG4B-217ENST00000475693 MFAP3P55082 362 aa19.4■□□□□ 0.7
ATG4B-217ENST00000475693 GFPT1Q06210 699 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-217ENST00000475693 ZNF598Q86UK7 904 aaKnown RBP19.4■□□□□ 0.7
ATG4B-217ENST00000475693 TMTC1Q8IUR5 882 aa19.4■□□□□ 0.7
ATG4B-217ENST00000475693 PPP1R10Q96QC0 940 aaKnown RBP19.4■□□□□ 0.7
ATG4B-217ENST00000475693 SDCBP2Q9H190 292 aa19.4■□□□□ 0.7
ATG4B-217ENST00000475693 SMYD3Q9H7B4 428 aa19.4■□□□□ 0.7
ATG4B-217ENST00000475693 RSAD1Q9HA92 442 aa19.4■□□□□ 0.7
ATG4B-217ENST00000475693 REXO2Q9Y3B8 237 aaKnown RBP19.4■□□□□ 0.7
ATG4B-217ENST00000475693 CASTOR2A6NHX0 329 aa19.4■□□□□ 0.7
ATG4B-217ENST00000475693 SPTLC1O15269 473 aa19.4■□□□□ 0.7
ATG4B-217ENST00000475693 KCNE1P15382 129 aa19.4■□□□□ 0.7
ATG4B-217ENST00000475693 POU5F1Q01860 360 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms