RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, human

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L-208	ENST00000474839	CDR2	Q01850	454 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	PDIA2	Q13087	525 aa	Known RBP	12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SPARCL1	Q14515	664 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	MTFR1	Q15390	333 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SPDYC	Q5MJ68	293 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ACAD10	Q6JQN1	1059 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	MOXD1	Q6UVY6	613 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	PARD3B	Q8TEW8	1205 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TBC1D10A	Q9BXI6	508 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	OSBPL8	Q9BZF1	889 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	LRRC19	Q9H756	370 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SPATS2L	Q9NUQ6	558 aa	Known RBP	12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	RAB20	Q9NX57	234 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SLC5A4	Q9NY91	659 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	WHRN	Q9P202	907 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SEL1L	Q9UBV2	794 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ZFP69B	Q9UJL9	534 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CHKB	Q9Y259	395 aa		12.81	□□□□□ -0.36
SKIV2L-208	ENST00000474839	KRT4	P19013	534 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CNGA1	P29973	690 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SLC8A3	P57103	927 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TAS2R40	P59535	323 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	RIPK1	Q13546	671 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	MFSD5	Q6N075	450 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	LVRN	Q6Q4G3	990 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TMEM270	Q6UE05	265 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CCDC89	Q8N998	374 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	KCNH7	Q9NS40	1196 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SCN7A	Q01118	1682 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	BRWD3	Q6RI45	1802 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CTCF	P49711	727 aa	Predicted RBP	12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SLC1A5	Q15758	541 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SV2A	Q7L0J3	742 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	FAM71A	Q8IYT1	594 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	VPS52	Q8N1B4	723 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	FBXL13	Q8NEE6	735 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	IL31RA	Q8NI17	732 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	UTP4	Q969X6	686 aa	Known RBP	12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	MCUR1	Q96AQ8	359 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	FNBP1	Q96RU3	617 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ZCWPW1	Q9H0M4	648 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	STK32B	Q9NY57	414 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TLR3	O15455	904 aa	Known RBP	12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ACOT2	P49753	483 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	POLE2	P56282	527 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	EFTUD2	Q15029	972 aa	Known RBP eCLIP	12.8	□□□□□ -0.36	3e-10	■■■■■ 47.3
SKIV2L-208	ENST00000474839	GALNTL6	Q49A17	601 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	MIS18BP1	Q6P0N0	1132 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	LMNTD2	Q8IXW0	634 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	FAM13C	Q8NE31	585 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CRYGN	Q8WXF5	182 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	MKL1	Q969V6	931 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TMEM121	Q9BTD3	319 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	DLGAP2	Q9P1A6	1054 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	DNPEP	Q9ULA0	475 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CTDP1	Q9Y5B0	961 aa	Predicted RBP	12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	PCDHB4	Q9Y5E5	795 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	STK24	Q9Y6E0	443 aa		12.8	□□□□□ -0.36
SKIV2L-208	ENST00000474839	DDX60L	Q5H9U9	1706 aa	Known RBP	12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	LAMB1	P07942	1786 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ZBED4	O75132	1171 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TCF4	P15884	667 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	YWHAB	P31946	246 aa	Known RBP	12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ABL2	P42684	1182 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	R3HDM1	Q15032	1099 aa	Known RBP	12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SMAD1	Q15797	465 aa	Known RBP	12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SLC15A2	Q16348	729 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	C1orf220	Q5T0J3	134 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	DPH6	Q7L8W6	267 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CD101	Q93033	1021 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	C1orf112	Q9NSG2	853 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	UVRAG	Q9P2Y5	699 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CCPG1	Q9ULG6	757 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SMCHD1	A6NHR9	2005 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	DPPA5	A6NC42	116 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	FSCN2	O14926	492 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	KRT1	P04264	644 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	GZMA	P12544	262 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	PECAM1	P16284	738 aa	Predicted RBP	12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ITGB5	P18084	799 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SSTR1	P30872	391 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CIITA	P33076	1130 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	CETN2	P41208	172 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	POLG	P54098	1239 aa	Predicted RBP	12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	SMTNL2	Q2TAL5	461 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TMEM154	Q6P9G4	183 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	DCUN1D2	Q6PH85	259 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ITFG2	Q969R8	447 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TTC17	Q96AE7	1141 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	KIAA1586	Q9HCI6	787 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	KMT5A	Q9NQR1	393 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	USH1C	Q9Y6N9	552 aa		12.79	□□□□□ -0.36
SKIV2L-208	ENST00000474839	LRRD1	A4D1F6	860 aa		12.78	□□□□□ -0.36
SKIV2L-208	ENST00000474839	TP73	O15350	636 aa		12.78	□□□□□ -0.36
SKIV2L-208	ENST00000474839	DGKZ	Q13574	1117 aa		12.78	□□□□□ -0.36
SKIV2L-208	ENST00000474839	BBS9	Q3SYG4	887 aa		12.78	□□□□□ -0.36
SKIV2L-208	ENST00000474839	WDR44	Q5JSH3	913 aa		12.78	□□□□□ -0.36
SKIV2L-208	ENST00000474839	RFWD3	Q6PCD5	774 aa		12.78	□□□□□ -0.36
SKIV2L-208	ENST00000474839	ZC3H18	Q86VM9	953 aa	Known RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms