RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 NTHL1P78549 312 aa16.46■□□□□ 0.23
VARS-223ENST00000474643 SOX4Q06945 474 aaPredicted RBP16.46■□□□□ 0.23
VARS-223ENST00000474643 ZNF280DQ6N043 979 aa16.46■□□□□ 0.23
VARS-223ENST00000474643 SHC4Q6S5L8 630 aa16.46■□□□□ 0.23
VARS-223ENST00000474643 HAUS6Q7Z4H7 955 aa16.46■□□□□ 0.23
VARS-223ENST00000474643 SLC44A3Q8N4M1 653 aa16.46■□□□□ 0.23
VARS-223ENST00000474643 IQUBQ8NA54 791 aa16.46■□□□□ 0.23
VARS-223ENST00000474643 APPL2Q8NEU8 664 aa16.46■□□□□ 0.23
VARS-223ENST00000474643 LEO1Q8WVC0 666 aaPredicted RBP16.46■□□□□ 0.23
VARS-223ENST00000474643 KIF12Q96FN5 646 aa16.46■□□□□ 0.23
VARS-223ENST00000474643 CHAMP1Q96JM3 812 aa16.46■□□□□ 0.23
VARS-223ENST00000474643 ZMAT2Q96NC0 199 aaKnown RBP16.46■□□□□ 0.23
VARS-223ENST00000474643 SCAND2PQ9GZW5 306 aaPredicted RBP16.46■□□□□ 0.23
VARS-223ENST00000474643 CYP4F11Q9HBI6 524 aa16.46■□□□□ 0.23
VARS-223ENST00000474643 MRPS23Q9Y3D9 190 aaKnown RBP16.46■□□□□ 0.23
VARS-223ENST00000474643 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.46■□□□□ 0.23
VARS-223ENST00000474643 NUMBLQ9Y6R0 609 aa16.46■□□□□ 0.23
VARS-223ENST00000474643 CXCL8P10145 99 aa16.45■□□□□ 0.22
VARS-223ENST00000474643 CPB1P15086 417 aa16.45■□□□□ 0.22
VARS-223ENST00000474643 ROR1Q01973 937 aa16.45■□□□□ 0.22
VARS-223ENST00000474643 MCL1Q07820 350 aa16.45■□□□□ 0.22
VARS-223ENST00000474643 CTXN3Q4LDR2 81 aa16.45■□□□□ 0.22
VARS-223ENST00000474643 ALKAL1Q6UXT8 129 aa16.45■□□□□ 0.22
VARS-223ENST00000474643 RTL10Q7L3V2 364 aa16.45■□□□□ 0.22
VARS-223ENST00000474643 USP37Q86T82 979 aa16.45■□□□□ 0.22
VARS-223ENST00000474643 C3orf58Q8NDZ4 430 aa16.45■□□□□ 0.22
VARS-223ENST00000474643 ST13P5Q8NFI4 369 aaPredicted RBP16.45■□□□□ 0.22
VARS-223ENST00000474643 PHOX2BQ99453 314 aa16.45■□□□□ 0.22
VARS-223ENST00000474643 LRRC27Q9C0I9 530 aa16.45■□□□□ 0.22
VARS-223ENST00000474643 RPF1Q9H9Y2 349 aaKnown RBP16.45■□□□□ 0.22
VARS-223ENST00000474643 WNT16Q9UBV4 365 aa16.45■□□□□ 0.22
VARS-223ENST00000474643 MTCL1Q9Y4B5 1905 aaKnown RBP16.45■□□□□ 0.22
VARS-223ENST00000474643 A0A087X0B3 334 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 POLR2DO15514 142 aaKnown RBP16.44■□□□□ 0.22
VARS-223ENST00000474643 TRAK2O60296 914 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 GFRA3O60609 400 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 IDEP14735 1019 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 AOC1P19801 751 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 NCKAP1LP55160 1127 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 SPAG1Q07617 926 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 HTR4Q13639 388 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 XKR4Q5GH76 650 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 GPR152Q8TDT2 470 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 ING5Q8WYH8 240 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 DDX12PQ92771 950 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 FGF13Q92913 245 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 SHDQ96IW2 340 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 PYM1Q9BRP8 204 aaKnown RBP16.44■□□□□ 0.22
VARS-223ENST00000474643 MSTO1Q9BUK6 570 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 CUEDC2Q9H467 287 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 PLEKHA5Q9HAU0 1116 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 ARHGEF3Q9NR81 526 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 TUBGCP4Q9UGJ1 667 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 TBX20Q9UMR3 447 aa16.44■□□□□ 0.22
VARS-223ENST00000474643 MYMKA6NI61 221 aa16.43■□□□□ 0.22
VARS-223ENST00000474643 AMPD3Q01432 767 aa16.43■□□□□ 0.22
VARS-223ENST00000474643 SLC10A6Q3KNW5 377 aa16.43■□□□□ 0.22
VARS-223ENST00000474643 RESP18Q5W5W9 173 aa16.43■□□□□ 0.22
VARS-223ENST00000474643 CWF19L1Q69YN2 538 aaKnown RBP16.43■□□□□ 0.22
VARS-223ENST00000474643 IQCEQ6IPM2 695 aa16.43■□□□□ 0.22
VARS-223ENST00000474643 DSTYKQ6XUX3 929 aa16.43■□□□□ 0.22
VARS-223ENST00000474643 ZNF461Q8TAF7 563 aa16.43■□□□□ 0.22
VARS-223ENST00000474643 SUSD3Q96L08 255 aa16.43■□□□□ 0.22
VARS-223ENST00000474643 TBC1D17Q9HA65 648 aa16.43■□□□□ 0.22
VARS-223ENST00000474643 HCFC1R1Q9NWW0 138 aa16.43■□□□□ 0.22
VARS-223ENST00000474643 UBQLN1Q9UMX0 589 aaKnown RBP16.43■□□□□ 0.22
VARS-223ENST00000474643 CITO14578 2027 aa16.43■□□□□ 0.22
VARS-223ENST00000474643 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.42■□□□□ 0.22
VARS-223ENST00000474643 GOLGA6L4A6NEF3 574 aa16.42■□□□□ 0.22
VARS-223ENST00000474643 ABLIM1O14639 778 aa16.42■□□□□ 0.22
VARS-223ENST00000474643 OGTO15294 1046 aa16.42■□□□□ 0.22
VARS-223ENST00000474643 POU2F2P09086 479 aa16.42■□□□□ 0.22
VARS-223ENST00000474643 PTPN2P17706 415 aa16.42■□□□□ 0.22
VARS-223ENST00000474643 IGFBP6P24592 240 aaPredicted RBP16.42■□□□□ 0.22
VARS-223ENST00000474643 YWHAHQ04917 246 aaPredicted RBP16.42■□□□□ 0.22
VARS-223ENST00000474643 SLC8B1Q6J4K2 584 aa16.42■□□□□ 0.22
VARS-223ENST00000474643 PARM1Q6UWI2 310 aa16.42■□□□□ 0.22
VARS-223ENST00000474643 CEP57L1Q8IYX8 460 aa16.42■□□□□ 0.22
VARS-223ENST00000474643 BEST2Q8NFU1 509 aa16.42■□□□□ 0.22
VARS-223ENST00000474643 ITFG1Q8TB96 612 aa16.42■□□□□ 0.22
VARS-223ENST00000474643 KXD1Q9BQD3 176 aa16.42■□□□□ 0.22
VARS-223ENST00000474643 CORO1BQ9BR76 489 aa16.42■□□□□ 0.22
VARS-223ENST00000474643 TNMDQ9H2S6 317 aa16.42■□□□□ 0.22
VARS-223ENST00000474643 GDPD2Q9HCC8 539 aa16.42■□□□□ 0.22
VARS-223ENST00000474643 KCNH3Q9ULD8 1083 aa16.42■□□□□ 0.22
VARS-223ENST00000474643 VWA8A3KMH1 1905 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 A0A1B0GVL5 298 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 WDR27A2RRH5 827 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 ANHXE9PGG2 379 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 PAPLNO95428 1278 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 RHOP08100 348 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 GAP43P17677 238 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 NMT1P30419 496 aaKnown RBP16.41■□□□□ 0.22
VARS-223ENST00000474643 ZNF131P52739 623 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 PFKPQ01813 784 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 CYP4A22Q5TCH4 519 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 TPGS2Q68CL5 300 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 ADALQ6DHV7 355 aa16.41■□□□□ 0.22
VARS-223ENST00000474643 RSPO2Q6UXX9 243 aaPredicted RBP16.41■□□□□ 0.22
VARS-223ENST00000474643 PDZD4Q76G19 769 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms