RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 ATP2B4P23634 1241 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 SREBF1P36956 1147 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 PSMC4P43686 418 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 KRT17Q04695 432 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 RASA3Q14644 834 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 TNIP1Q15025 636 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 SLC5A9Q2M3M2 681 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 SLC35G1Q2M3R5 365 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 SPRED3Q2MJR0 410 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 KLHL38Q2WGJ6 581 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 LIN9Q5TKA1 542 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 HHATQ5VTY9 493 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 DCAF12L1Q5VU92 463 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 USP17L2Q6R6M4 530 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 POTEBQ6S5H4 581 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 VSTM1Q6UX27 236 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 KCNK18Q7Z418 384 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 ERICH1Q86X53 443 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 NME8Q8N427 588 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 STKLD1Q8NE28 680 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 SPDYE1Q8NFV5 336 aaPredicted RBP8.51□□□□□ -1.05
CCDC93-208ENST00000474546 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.51□□□□□ -1.05
CCDC93-208ENST00000474546 RAB3IL1Q8TBN0 382 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 ZNF564Q8TBZ8 553 aaPredicted RBP8.51□□□□□ -1.05
CCDC93-208ENST00000474546 TEKT4Q8WW24 435 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 GLG1Q92896 1179 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 MCUR1Q96AQ8 359 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 C18orf8Q96DM3 657 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 MASTLQ96GX5 879 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 RBM41Q96IZ5 413 aaKnown RBP8.51□□□□□ -1.05
CCDC93-208ENST00000474546 FGD4Q96M96 766 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 FAM161BQ96MY7 647 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 GBP5Q96PP8 586 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 SETDB2Q96T68 719 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 AMNQ9BXJ7 453 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 RTFDC1Q9BY42 306 aaPredicted RBP8.51□□□□□ -1.05
CCDC93-208ENST00000474546 ANO3Q9BYT9 981 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 TRIM55Q9BYV6 548 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 FRMD8Q9BZ67 464 aaPredicted RBP8.51□□□□□ -1.05
CCDC93-208ENST00000474546 THAP2Q9H0W7 228 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 VPS11Q9H270 941 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 ST6GALNAC4Q9H4F1 302 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 STX18Q9P2W9 335 aaKnown RBP8.51□□□□□ -1.05
CCDC93-208ENST00000474546 CIDEBQ9UHD4 219 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 ZFP69BQ9UJL9 534 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 PHTF1Q9UMS5 762 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 AGAP1Q9UPQ3 857 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 SHOC2Q9UQ13 582 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 L3MBTL1Q9Y468 752 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 SCINQ9Y6U3 715 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 ZNF646O15015 1829 aaPredicted RBP8.51□□□□□ -1.05
CCDC93-208ENST00000474546 POLR2AP24928 1970 aaKnown RBP8.51□□□□□ -1.05
CCDC93-208ENST00000474546 NFASCO94856 1347 aa8.51□□□□□ -1.05
CCDC93-208ENST00000474546 EXOC1LA0A1B0GW35 172 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 SMIM23A6NLE4 172 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 USP17L5A8MUK1 530 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 H0YCG3 227 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 PIK3CDO00329 1044 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 EDF1O60869 148 aaKnown RBP8.5□□□□□ -1.05
CCDC93-208ENST00000474546 LRRN2O75325 713 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 FKBP6O75344 327 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 CIB2O75838 187 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 ACTN1P12814 892 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 TAC1P20366 129 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 ABCB4P21439 1286 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 COMTP21964 271 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 FGFR4P22455 802 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 ADCY8P40145 1251 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 BTDP43251 543 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 RPS6KA3P51812 740 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 SLC34A1Q06495 639 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 MCL1Q07820 350 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 BIRC2Q13490 618 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 MOGSQ13724 837 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 MORF4L2Q15014 288 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 ARHGEF6Q15052 776 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 DNAL1Q4LDG9 190 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 ARSHQ5FYA8 562 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 MAP3K21Q5TCX8 1036 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 CCDC25Q86WR0 208 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 CATSPER3Q86XQ3 398 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 FAM178BQ8IXR5 827 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 ADGRF4Q8IZF3 695 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 DRAXINQ8NBI3 349 aaPredicted RBP8.5□□□□□ -1.05
CCDC93-208ENST00000474546 ETNPPLQ8TBG4 499 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 ALG3Q92685 438 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 ITFG2Q969R8 447 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 ERP27Q96DN0 273 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 PPP1R12CQ9BZL4 782 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 JMJD4Q9H9V9 463 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 SLC24A3Q9HC58 644 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 VAT1LQ9HCJ6 419 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 OSGEPQ9NPF4 335 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 TMEM260Q9NX78 707 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 THEGQ9P2T0 379 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 PSMC3IPQ9P2W1 217 aaPredicted RBP8.5□□□□□ -1.05
CCDC93-208ENST00000474546 COMMD3-BMI1R4GMX3 469 aa8.5□□□□□ -1.05
CCDC93-208ENST00000474546 ATRXP46100 2492 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 ZMYM2Q9UBW7 1377 aa8.49□□□□□ -1.05
CCDC93-208ENST00000474546 EML1O00423 815 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms