RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 ZNF623O75123 536 aa21.9■■□□□ 1.1
CDHR3-210ENST00000474330 CSF2RAP15509 400 aa21.9■■□□□ 1.1
CDHR3-210ENST00000474330 FERP16591 822 aa21.9■■□□□ 1.1
CDHR3-210ENST00000474330 PRKCIP41743 596 aa21.9■■□□□ 1.1
CDHR3-210ENST00000474330 RAB27AP51159 221 aa21.9■■□□□ 1.1
CDHR3-210ENST00000474330 MYL6P60660 151 aa21.9■■□□□ 1.1
CDHR3-210ENST00000474330 MAPK8IP2Q13387 824 aaPredicted RBP21.9■■□□□ 1.1
CDHR3-210ENST00000474330 SCARA3Q6AZY7 606 aa21.9■■□□□ 1.1
CDHR3-210ENST00000474330 MRPL10Q7Z7H8 261 aaKnown RBP21.9■■□□□ 1.1
CDHR3-210ENST00000474330 HACE1Q8IYU2 909 aa21.9■■□□□ 1.1
CDHR3-210ENST00000474330 CXorf38Q8TB03 319 aa21.9■■□□□ 1.1
CDHR3-210ENST00000474330 KAT5Q92993 513 aa21.9■■□□□ 1.1
CDHR3-210ENST00000474330 ZMAT2Q96NC0 199 aaKnown RBP21.9■■□□□ 1.1
CDHR3-210ENST00000474330 WNT8AQ9H1J5 351 aa21.9■■□□□ 1.1
CDHR3-210ENST00000474330 CXCL16Q9H2A7 254 aa21.9■■□□□ 1.1
CDHR3-210ENST00000474330 SIX4Q9UIU6 781 aa21.9■■□□□ 1.1
CDHR3-210ENST00000474330 BZW2Q9Y6E2 419 aaKnown RBP21.9■■□□□ 1.1
CDHR3-210ENST00000474330 EPN1Q9Y6I3 576 aaPredicted RBP21.9■■□□□ 1.1
CDHR3-210ENST00000474330 FOXN3O00409 490 aaPredicted RBP21.89■■□□□ 1.09
CDHR3-210ENST00000474330 ZNF500O60304 480 aaPredicted RBP21.89■■□□□ 1.09
CDHR3-210ENST00000474330 KCNE1P15382 129 aa21.89■■□□□ 1.09
CDHR3-210ENST00000474330 NOP14P78316 857 aaKnown RBP21.89■■□□□ 1.09
CDHR3-210ENST00000474330 SHC3Q92529 594 aa21.89■■□□□ 1.09
CDHR3-210ENST00000474330 TAF4BQ92750 862 aa21.89■■□□□ 1.09
CDHR3-210ENST00000474330 JAKMIP2Q96AA8 810 aa21.89■■□□□ 1.09
CDHR3-210ENST00000474330 VWCEQ96DN2 955 aa21.89■■□□□ 1.09
CDHR3-210ENST00000474330 APOBEC3GQ9HC16 384 aaKnown RBP21.89■■□□□ 1.09
CDHR3-210ENST00000474330 ITGA11Q9UKX5 1188 aa21.89■■□□□ 1.09
CDHR3-210ENST00000474330 TET1Q8NFU7 2136 aa21.89■■□□□ 1.09
CDHR3-210ENST00000474330 A0A0U1RQF3 1178 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 NDUFA10O95299 355 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 PARNO95453 639 aaKnown RBP21.88■■□□□ 1.09
CDHR3-210ENST00000474330 PLEKP08567 350 aaPredicted RBP21.88■■□□□ 1.09
CDHR3-210ENST00000474330 CCDC172P0C7W6 258 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 ITGA4P13612 1032 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 CYLC1P35663 651 aaPredicted RBP21.88■■□□□ 1.09
CDHR3-210ENST00000474330 ARID5AQ03989 594 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 KLHL30Q0D2K2 578 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 SPOPLQ6IQ16 392 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 FAM43BQ6ZT52 329 aaPredicted RBP21.88■■□□□ 1.09
CDHR3-210ENST00000474330 TOGARAM2Q6ZUX3 1019 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 ELMO3Q96BJ8 720 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 CCDC42Q96M95 316 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 ADAM2Q99965 735 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 IFIH1Q9BYX4 1025 aaKnown RBP21.88■■□□□ 1.09
CDHR3-210ENST00000474330 XYLT2Q9H1B5 865 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 DPP3Q9NY33 737 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 NUB1Q9Y5A7 615 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 CDH23Q9H251 3354 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 GFPT2O94808 682 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 ITGB3P05106 788 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 PNMA6AP0CW24 399 aaPredicted RBP21.88■■□□□ 1.09
CDHR3-210ENST00000474330 SKIP12755 728 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 TBXAS1P24557 533 aaPredicted RBP21.88■■□□□ 1.09
CDHR3-210ENST00000474330 CCL23P55773 120 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 TDRD12Q587J7 1177 aaKnown RBP21.88■■□□□ 1.09
CDHR3-210ENST00000474330 CCAR2Q8N163 923 aaKnown RBP21.88■■□□□ 1.09
CDHR3-210ENST00000474330 C17orf53Q8N3J3 647 aaPredicted RBP21.88■■□□□ 1.09
CDHR3-210ENST00000474330 KLK14Q9P0G3 267 aa21.88■■□□□ 1.09
CDHR3-210ENST00000474330 UBQLN1Q9UMX0 589 aaKnown RBP21.88■■□□□ 1.09
CDHR3-210ENST00000474330 SMIM28A0A1B0GU29 152 aa21.87■■□□□ 1.09
CDHR3-210ENST00000474330 KRT19P08727 400 aa21.87■■□□□ 1.09
CDHR3-210ENST00000474330 ATICP31939 592 aa21.87■■□□□ 1.09
CDHR3-210ENST00000474330 EIF4A3P38919 411 aaKnown RBP21.87■■□□□ 1.09
CDHR3-210ENST00000474330 CUL2Q13617 745 aa21.87■■□□□ 1.09
CDHR3-210ENST00000474330 ASTE1Q2TB18 679 aaPredicted RBP21.87■■□□□ 1.09
CDHR3-210ENST00000474330 GPIHBP1Q8IV16 184 aa21.87■■□□□ 1.09
CDHR3-210ENST00000474330 FAM71AQ8IYT1 594 aa21.87■■□□□ 1.09
CDHR3-210ENST00000474330 TMEM199Q8N511 208 aa21.87■■□□□ 1.09
CDHR3-210ENST00000474330 BEST2Q8NFU1 509 aa21.87■■□□□ 1.09
CDHR3-210ENST00000474330 FAXDC2Q96IV6 333 aa21.87■■□□□ 1.09
CDHR3-210ENST00000474330 HAUS4Q9H6D7 363 aa21.87■■□□□ 1.09
CDHR3-210ENST00000474330 VRTNQ9H8Y1 702 aa21.87■■□□□ 1.09
CDHR3-210ENST00000474330 GIT1Q9Y2X7 761 aa21.87■■□□□ 1.09
CDHR3-210ENST00000474330 ADGRG1Q9Y653 693 aa21.87■■□□□ 1.09
CDHR3-210ENST00000474330 EIF3CLB5ME19 914 aaKnown RBP21.86■■□□□ 1.09
CDHR3-210ENST00000474330 CCP110O43303 1012 aa21.86■■□□□ 1.09
CDHR3-210ENST00000474330 XPOTO43592 962 aaKnown RBP21.86■■□□□ 1.09
CDHR3-210ENST00000474330 NBNO60934 754 aa21.86■■□□□ 1.09
CDHR3-210ENST00000474330 RBP5P82980 135 aa21.86■■□□□ 1.09
CDHR3-210ENST00000474330 GPNMBQ14956 572 aa21.86■■□□□ 1.09
CDHR3-210ENST00000474330 ZNF699Q32M78 642 aa21.86■■□□□ 1.09
CDHR3-210ENST00000474330 SMYD5Q6GMV2 418 aa21.86■■□□□ 1.09
CDHR3-210ENST00000474330 EIF3CQ99613 913 aaKnown RBP21.86■■□□□ 1.09
CDHR3-210ENST00000474330 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.86■■□□□ 1.09
CDHR3-210ENST00000474330 FTHL17Q9BXU8 183 aa21.86■■□□□ 1.09
CDHR3-210ENST00000474330 RGS18Q9NS28 235 aa21.86■■□□□ 1.09
CDHR3-210ENST00000474330 PPP2R2CQ9Y2T4 447 aa21.86■■□□□ 1.09
CDHR3-210ENST00000474330 STAU1O95793 577 aaKnown RBP21.85■■□□□ 1.09
CDHR3-210ENST00000474330 CCDC175P0C221 793 aa21.85■■□□□ 1.09
CDHR3-210ENST00000474330 ACRP10323 421 aa21.85■■□□□ 1.09
CDHR3-210ENST00000474330 PTK2Q05397 1052 aa21.85■■□□□ 1.09
CDHR3-210ENST00000474330 PPIGQ13427 754 aaKnown RBP eCLIP21.85■■□□□ 1.09
CDHR3-210ENST00000474330 GLRA4Q5JXX5 417 aa21.85■■□□□ 1.09
CDHR3-210ENST00000474330 TMEM240Q5SV17 173 aa21.85■■□□□ 1.09
CDHR3-210ENST00000474330 SCLYQ96I15 445 aa21.85■■□□□ 1.09
CDHR3-210ENST00000474330 DESI2Q9BSY9 194 aa21.85■■□□□ 1.09
CDHR3-210ENST00000474330 DEF6Q9H4E7 631 aa21.85■■□□□ 1.09
CDHR3-210ENST00000474330 SPTLC3Q9NUV7 552 aa21.85■■□□□ 1.09
CDHR3-210ENST00000474330 AGAP1Q9UPQ3 857 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms