RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TDRPQ86YL5 185 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 FAM118BQ9BPY3 351 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 ADAM33Q9BZ11 813 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 CHCHD3Q9NX63 227 aaKnown RBP19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 ANKFY1Q9P2R3 1169 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 SPATA31A5Q5VU36 1347 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 SPATA31A6Q5VVP1 1343 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 SPATA31A7Q8IWB4 1347 aa19.73■□□□□ 0.75
ECHDC1-214ENST00000474289 COL5A3P25940 1745 aaPredicted RBP19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 LDHCP07864 332 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 VPS52Q8N1B4 723 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 ARHGAP18Q8N392 663 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 LENG9Q96B70 501 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 ZWILCHQ9H900 591 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 DDX43Q9NXZ2 648 aaKnown RBP19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 SENP1Q9P0U3 644 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 UVRAGQ9P2Y5 699 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 PLIN4Q96Q06 1357 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 TROVE2P10155 538 aaKnown RBP eCLIP19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 ARHGAP4P98171 946 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 RINLQ6ZS11 566 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 ZNF365Q70YC5 407 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 KCTD1Q719H9 257 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 TRIM74Q86UV6 250 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 TRIM73Q86UV7 250 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 SLC47A2Q86VL8 602 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 KLHL23Q8NBE8 558 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 PRR11Q96HE9 360 aaPredicted RBP19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 NSL1Q96IY1 281 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 TUBGCP5Q96RT8 1024 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 FIZ1Q96SL8 496 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 NYXQ9GZU5 481 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 ASCC2Q9H1I8 757 aaPredicted RBP19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 VCX3BQ9H321 246 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 VCX3AQ9NNX9 186 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 SAYSD1Q9NPB0 183 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 HEY2Q9UBP5 337 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 EMSYQ7Z589 1322 aa19.72■□□□□ 0.75
ECHDC1-214ENST00000474289 A0A0G2JND7 137 aa19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 A0A1W2PPM1 405 aa19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 AKR1B1P15121 316 aa19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 FMO1Q01740 532 aa19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 THOC5Q13769 683 aaKnown RBP19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 PCNX4Q63HM2 1172 aa19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 ZCCHC9Q8N567 271 aaKnown RBP19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 CCDC89Q8N998 374 aa19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 CRYGNQ8WXF5 182 aa19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 P2RX7Q99572 595 aaKnown RBP19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 TAS2R1Q9NYW7 299 aa19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 PHF24Q9UPV7 400 aa19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 UMODL1Q5DID0 1318 aa19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 CETN2P41208 172 aa19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 MOXD1Q6UVY6 613 aa19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 BBOF1Q8ND07 529 aa19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 MRRFQ96E11 262 aaKnown RBP19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 PARVGQ9HBI0 331 aa19.71■□□□□ 0.75
ECHDC1-214ENST00000474289 ZNFX1Q9P2E3 1918 aaKnown RBP19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 TNRC6CQ9HCJ0 1690 aaKnown RBP19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 AMPD1P23109 780 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 RHBDL3P58872 404 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 RTP1P59025 263 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 FASTKD3Q14CZ7 662 aaKnown RBP19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 HP1BP3Q5SSJ5 553 aaPredicted RBP19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 ZNF720Q7Z2F6 126 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 PDCD7Q8N8D1 485 aaKnown RBP19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 TTC25Q96NG3 672 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 EIF2AK1Q9BQI3 630 aaKnown RBP19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 HEMGNQ9BXL5 484 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 MAK16Q9BXY0 300 aaKnown RBP19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 MMADHCQ9H3L0 296 aaPredicted RBP19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 FBXO6Q9NRD1 293 aaPredicted RBP19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 SLC4A7Q9Y6M7 1214 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 WDR91A4D1P6 747 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 FAM86B1E9PN63 330 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 TBX3O15119 743 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 CYP26A1O43174 497 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 FAM86B2P0C5J1 330 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 ADRA1DP25100 572 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 PPP3CAQ08209 521 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 PPP2R5CQ13362 524 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 DPP8Q6V1X1 898 aaPredicted RBP19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 CAPN12Q6ZSI9 719 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 TUBB6Q9BUF5 446 aa19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 LARSQ9P2J5 1176 aaKnown RBP19.7■□□□□ 0.74
ECHDC1-214ENST00000474289 EML1O00423 815 aa19.69■□□□□ 0.74
ECHDC1-214ENST00000474289 PLS3P13797 630 aa19.69■□□□□ 0.74
ECHDC1-214ENST00000474289 PIK3CAP42336 1068 aa19.69■□□□□ 0.74
ECHDC1-214ENST00000474289 P3H1Q32P28 736 aa19.69■□□□□ 0.74
ECHDC1-214ENST00000474289 LIN52Q52LA3 116 aa19.69■□□□□ 0.74
ECHDC1-214ENST00000474289 DAB2IPQ5VWQ8 1189 aa19.69■□□□□ 0.74
ECHDC1-214ENST00000474289 RFX8Q6ZV50 586 aa19.69■□□□□ 0.74
ECHDC1-214ENST00000474289 C1orf186Q6ZWK4 172 aa19.69■□□□□ 0.74
ECHDC1-214ENST00000474289 HAPLN3Q96S86 360 aa19.69■□□□□ 0.74
ECHDC1-214ENST00000474289 ATXN10Q9UBB4 475 aa19.69■□□□□ 0.74
ECHDC1-214ENST00000474289 VAV3Q9UKW4 847 aa19.69■□□□□ 0.74
ECHDC1-214ENST00000474289 SUGT1Q9Y2Z0 365 aa19.69■□□□□ 0.74
ECHDC1-214ENST00000474289 RPS6KL1Q9Y6S9 549 aa19.69■□□□□ 0.74
ECHDC1-214ENST00000474289 ATRNL1Q5VV63 1379 aa19.69■□□□□ 0.74
ECHDC1-214ENST00000474289 COL16A1Q07092 1604 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms