RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 PPP1R2P41236 205 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 GUCY2FP51841 1108 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 TFF2Q03403 129 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 MYBPC2Q14324 1141 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 COL19A1Q14993 1142 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 PSMD5Q16401 504 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 DUOXA2Q1HG44 320 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 LEXMQ3ZCV2 418 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 RTP2Q5QGT7 225 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 C9orf57Q5W0N0 161 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 CEP135Q66GS9 1140 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 USP37Q86T82 979 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 SLC9A9Q8IVB4 645 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 C3orf58Q8NDZ4 430 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 PIK3R5Q8WYR1 880 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 SUSD3Q96L08 255 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 ZNF560Q96MR9 790 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 FNIP2Q9P278 1114 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 CD207Q9UJ71 328 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 TRAF3IP3Q9Y228 551 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 HCFC2Q9Y5Z7 792 aa14.87□□□□□ -0.03
USF1-205ENST00000473969 TEX28O15482 410 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 GLUD1P00367 558 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 DLATP10515 647 aaKnown RBP14.86□□□□□ -0.03
USF1-205ENST00000473969 HOXB8P17481 243 aaPredicted RBP14.86□□□□□ -0.03
USF1-205ENST00000473969 TKTP29401 623 aaKnown RBP14.86□□□□□ -0.03
USF1-205ENST00000473969 PNPLA4P41247 253 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 TAF6P49848 677 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 CYP24A1Q07973 514 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 PSMD6Q15008 389 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 CLUL1Q15846 466 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 CAMK4Q16566 473 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 SV2CQ496J9 727 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 TJAP1Q5JTD0 557 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 ISM2Q6H9L7 571 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 PRSS55Q6UWB4 352 aaPredicted RBP14.86□□□□□ -0.03
USF1-205ENST00000473969 TMEM184AQ6ZMB5 413 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 PALB2Q86YC2 1186 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 WDR49Q8IV35 697 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 GLYCTKQ8IVS8 523 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 EFCAB13Q8IY85 973 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 CSGALNACT2Q8N6G5 542 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 SPATA20Q8TB22 786 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 CCDC127Q96BQ5 260 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 FBXL18Q96ME1 805 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 DZANK1Q9NVP4 752 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 ITGA11Q9UKX5 1188 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 BARX2Q9UMQ3 279 aaPredicted RBP14.86□□□□□ -0.03
USF1-205ENST00000473969 PCDHB8Q9UN66 801 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 TRANK1O15050 2925 aa14.86□□□□□ -0.03
USF1-205ENST00000473969 PIRO00625 290 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 PSMA7O14818 248 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 ITGB3P05106 788 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 ODC1P11926 461 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 NR2F2P24468 414 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 CLCN4P51793 760 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 RBP5P82980 135 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 ADAM9Q13443 819 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 PTCRAQ6ISU1 281 aaPredicted RBP14.85□□□□□ -0.03
USF1-205ENST00000473969 CES5AQ6NT32 575 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 ANKRD54Q6NXT1 300 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 CD300LGQ6UXG3 332 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 METTL23Q86XA0 190 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 SMYD4Q8IYR2 804 aaPredicted RBP14.85□□□□□ -0.03
USF1-205ENST00000473969 LNX1Q8TBB1 728 aaPredicted RBP14.85□□□□□ -0.03
USF1-205ENST00000473969 INTS13Q9NVM9 706 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 DMAC2Q9NW81 257 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 MAN1B1Q9UKM7 699 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 AGAP1Q9UPQ3 857 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 MYO7AQ13402 2215 aa14.85□□□□□ -0.03
USF1-205ENST00000473969 ANO9A1A5B4 782 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 PHACTR2O75167 634 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 TBX10O75333 385 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 CLSTN1O94985 981 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 GLP2RO95838 553 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 C1RP00736 705 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 KRT13P13646 458 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 RPL17P18621 184 aaKnown RBP14.84□□□□□ -0.03
USF1-205ENST00000473969 IGFBP6P24592 240 aaPredicted RBP14.84□□□□□ -0.03
USF1-205ENST00000473969 POLR2BP30876 1174 aaKnown RBP14.84□□□□□ -0.03
USF1-205ENST00000473969 LTBRP36941 435 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 PRCPP42785 496 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 AP3M2P53677 418 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 LILRA4P59901 499 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 YWHAHQ04917 246 aaPredicted RBP14.84□□□□□ -0.03
USF1-205ENST00000473969 DLX2Q07687 328 aaPredicted RBP14.84□□□□□ -0.03
USF1-205ENST00000473969 MYO1EQ12965 1108 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 NFIL3Q16649 462 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 CTXN3Q4LDR2 81 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 COBLL1Q53SF7 1204 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 VARS2Q5ST30 1063 aaKnown RBP14.84□□□□□ -0.03
USF1-205ENST00000473969 LMBRD2Q68DH5 695 aaPredicted RBP14.84□□□□□ -0.03
USF1-205ENST00000473969 ZNF280DQ6N043 979 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 SLC22A17Q8WUG5 538 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 TMEM174Q8WUU8 243 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 MFSD14AQ96MC6 490 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 CGRRF1Q99675 332 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 MTMR12Q9C0I1 747 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 CLEC1BQ9P126 229 aa14.84□□□□□ -0.03
USF1-205ENST00000473969 MTRRQ9UBK8 725 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms