RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 PTPRZ1P23471 2315 aaPredicted RBP7.61□□□□□ -1.19
CKS1B-205ENST00000473344 ARHGEF35A5YM69 484 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 RNF223E7ERA6 249 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 TMEM189-UBE2V1I3L0A0 370 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 MAN2B1O00754 1011 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 ZNF197O14709 1029 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 ACTN4O43707 911 aaKnown RBP7.6□□□□□ -1.19
CKS1B-205ENST00000473344 TBC1D4O60343 1298 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 PFKFB2O60825 505 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 DTNBO60941 627 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 RHOP08100 348 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 FGFR3P22607 806 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 TARSP26639 723 aaKnown RBP7.6□□□□□ -1.19
CKS1B-205ENST00000473344 NAMPTP43490 491 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 RBM25P49756 843 aaKnown RBP7.6□□□□□ -1.19
CKS1B-205ENST00000473344 EFNA5P52803 228 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 YARSP54577 528 aaKnown RBP7.6□□□□□ -1.19
CKS1B-205ENST00000473344 ARPP19P56211 112 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 PKDCCQ504Y2 493 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 GLRA4Q5JXX5 417 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 PDZD4Q76G19 769 aaPredicted RBP7.6□□□□□ -1.19
CKS1B-205ENST00000473344 CATSPER3Q86XQ3 398 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 ELMOD1Q8N336 334 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 ZNF461Q8TAF7 563 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 ERMNQ8TAM6 284 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 DNASE1L2Q92874 299 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 CLDN23Q96B33 292 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 IFT74Q96LB3 600 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 CNTNAP3BQ96NU0 1288 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 CORO1BQ9BR76 489 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 CNTNAP3Q9BZ76 1288 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 EPC1Q9H2F5 836 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 TMEM134Q9H6X4 195 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 BRD9Q9H8M2 597 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 ZFP14Q9HCL3 533 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 TUFT1Q9NNX1 390 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 TOPORSQ9NS56 1045 aaPredicted RBP7.6□□□□□ -1.19
CKS1B-205ENST00000473344 TPCN1Q9ULQ1 816 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 NDRG2Q9UN36 371 aaKnown RBP7.6□□□□□ -1.19
CKS1B-205ENST00000473344 BACE2Q9Y5Z0 518 aa7.6□□□□□ -1.19
CKS1B-205ENST00000473344 RIF1Q5UIP0 2472 aaKnown RBP7.59□□□□□ -1.19
CKS1B-205ENST00000473344 GVINP1Q7Z2Y8 2422 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 BTBD18B2RXH4 712 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 I3L4J1 428 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 K7ERI5 159 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 CEBPBP17676 345 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 TKTP29401 623 aaKnown RBP7.59□□□□□ -1.19
CKS1B-205ENST00000473344 MCM7P33993 719 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 ATXN1P54253 815 aaKnown RBP7.59□□□□□ -1.19
CKS1B-205ENST00000473344 ROR1Q01973 937 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 MTAPQ13126 283 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 PTGDRQ13258 359 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 GRM2Q14416 872 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 SAFBQ15424 915 aaKnown RBP eCLIP7.59□□□□□ -1.19
CKS1B-205ENST00000473344 NAB2Q15742 525 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 UPP1Q16831 310 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 SLC5A9Q2M3M2 681 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 CYP4A22Q5TCH4 519 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 ATF7IP2Q5U623 682 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 TANGO2Q6ICL3 276 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 IQCEQ6IPM2 695 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 BLOC1S3Q6QNY0 202 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 DIS3L2Q8IYB7 885 aaKnown RBP7.59□□□□□ -1.19
CKS1B-205ENST00000473344 IRF7Q92985 503 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 MTMR9Q96QG7 549 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 RTKNQ9BST9 563 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 TRMT61BQ9BVS5 477 aaKnown RBP7.59□□□□□ -1.19
CKS1B-205ENST00000473344 CCDC94Q9BW85 323 aaPredicted RBP7.59□□□□□ -1.19
CKS1B-205ENST00000473344 CXCL16Q9H2A7 254 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 CYP4F11Q9HBI6 524 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 GOLGA2P5Q9HBQ8 144 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 SLC38A7Q9NVC3 462 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 USP20Q9Y2K6 914 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 NUB1Q9Y5A7 615 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 CACNA1AO00555 2505 aa7.59□□□□□ -1.19
CKS1B-205ENST00000473344 TDRD15B5MCY1 1934 aaKnown RBP7.58□□□□□ -1.2
CKS1B-205ENST00000473344 FAM186AA6NE01 2351 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 ARID2Q68CP9 1835 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 SMIM28A0A1B0GU29 152 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 ARHGEF37A1IGU5 675 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 H7C4K7 107 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 ZNF263O14978 683 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 LILRB5O75023 590 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 MED24O75448 989 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 CTDNEP1O95476 244 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 SPATA31C1P0DKV0 1188 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 ATF2P15336 505 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 PSMC3P17980 439 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 CYP11B2P19099 503 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 MSNP26038 577 aaKnown RBP7.58□□□□□ -1.2
CKS1B-205ENST00000473344 RPA1P27694 616 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 GDI1P31150 447 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 BRCC3P46736 316 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 CCR3P51677 355 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 OSTNP61366 133 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 SPEM2Q0P670 501 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 CCDC173Q0VFZ6 552 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 LPAL2Q16609 132 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 EEF1DP3Q658K8 133 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 HAUS3Q68CZ6 603 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms