RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 UNQ6494/PRO21346Q6UXR6 183 aa10.28□□□□□ -0.76
VCL-204ENST00000472585 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.28□□□□□ -0.76
VCL-204ENST00000472585 CEP120Q8N960 986 aa10.28□□□□□ -0.76
VCL-204ENST00000472585 FAM3CQ92520 227 aa10.28□□□□□ -0.76
VCL-204ENST00000472585 PRIMPOLQ96LW4 560 aa10.28□□□□□ -0.76
VCL-204ENST00000472585 ZMAT2Q96NC0 199 aaKnown RBP10.28□□□□□ -0.76
VCL-204ENST00000472585 KIFC3Q9BVG8 833 aa10.28□□□□□ -0.76
VCL-204ENST00000472585 PRMT7Q9NVM4 692 aaPredicted RBP10.28□□□□□ -0.76
VCL-204ENST00000472585 GDE1Q9NZC3 331 aa10.28□□□□□ -0.76
VCL-204ENST00000472585 GDAQ9Y2T3 454 aa10.28□□□□□ -0.76
VCL-204ENST00000472585 BACE2Q9Y5Z0 518 aa10.28□□□□□ -0.76
VCL-204ENST00000472585 VWA8A3KMH1 1905 aa10.28□□□□□ -0.76
VCL-204ENST00000472585 TICRRQ7Z2Z1 1910 aa10.28□□□□□ -0.76
VCL-204ENST00000472585 STK36Q9NRP7 1315 aa10.28□□□□□ -0.76
VCL-204ENST00000472585 ASPMQ8IZT6 3477 aa10.27□□□□□ -0.76
VCL-204ENST00000472585 SETXQ7Z333 2677 aaKnown RBP10.27□□□□□ -0.77
VCL-204ENST00000472585 ARHGEF37A1IGU5 675 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 WDR27A2RRH5 827 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 C1QTNF9BB2RNN3 333 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 TMEM189-UBE2V1I3L0A0 370 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 ACKR2O00590 384 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 B3GAT3O94766 335 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 BAG4O95429 457 aaKnown RBP10.27□□□□□ -0.77
VCL-204ENST00000472585 LARGE1O95461 756 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 C1QTNF9P0C862 333 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 ATP2B1P20020 1258 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 EMP3P54852 163 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 SATB1Q01826 763 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 ROR1Q01973 937 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 SRSF5Q13243 272 aaKnown RBP10.27□□□□□ -0.77
VCL-204ENST00000472585 PRPF4BQ13523 1007 aaKnown RBP10.27□□□□□ -0.77
VCL-204ENST00000472585 CALCRLQ16602 461 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 PPP1R15BQ5SWA1 713 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 HEATR6Q6AI08 1181 aaKnown RBP10.27□□□□□ -0.77
VCL-204ENST00000472585 PDXDC1Q6P996 788 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 ALKAL1Q6UXT8 129 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 LONP2Q86WA8 852 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 NECAB1Q8N987 351 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 IRF7Q92985 503 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 ELSPBP1Q96BH3 223 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 RSPRY1Q96DX4 576 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 TRMT61BQ9BVS5 477 aaKnown RBP10.27□□□□□ -0.77
VCL-204ENST00000472585 AVENQ9NQS1 362 aaPredicted RBP10.27□□□□□ -0.77
VCL-204ENST00000472585 C2orf42Q9NWW7 574 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 ORC3Q9UBD5 711 aaPredicted RBP10.27□□□□□ -0.77
VCL-204ENST00000472585 ARID2Q68CP9 1835 aa10.27□□□□□ -0.77
VCL-204ENST00000472585 PDCD11Q14690 1871 aaKnown RBP10.27□□□□□ -0.77
VCL-204ENST00000472585 DSPP15924 2871 aaKnown RBP10.26□□□□□ -0.77
VCL-204ENST00000472585 SMIM28A0A1B0GU29 152 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 SOBPA7XYQ1 873 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 N4BP3O15049 544 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 AXIN1O15169 862 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 REC8O95072 547 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 KCNK5O95279 499 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 VNN2O95498 520 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 PRKCBP05771 671 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 HOXB1P14653 301 aaPredicted RBP10.26□□□□□ -0.77
VCL-204ENST00000472585 GJA1P17302 382 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 PTPN2P17706 415 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 LIG1P18858 919 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 KRT2P35908 639 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 VIPR2P41587 438 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 RBM25P49756 843 aaKnown RBP10.26□□□□□ -0.77
VCL-204ENST00000472585 ELAVL2Q12926 359 aaKnown RBP10.26□□□□□ -0.77
VCL-204ENST00000472585 MRPL58Q14197 206 aaKnown RBP10.26□□□□□ -0.77
VCL-204ENST00000472585 SF3A2Q15428 464 aaKnown RBP10.26□□□□□ -0.77
VCL-204ENST00000472585 XKR4Q5GH76 650 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 STPG1Q5TH74 334 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 SLC8B1Q6J4K2 584 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 CPLX2Q6PUV4 134 aaKnown RBP10.26□□□□□ -0.77
VCL-204ENST00000472585 PADI6Q6TGC4 694 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 VITQ6UXI7 678 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 MAP4K3Q8IVH8 894 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 SPEM1Q8N4L4 309 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 FAM160A2Q8N612 972 aaPredicted RBP10.26□□□□□ -0.77
VCL-204ENST00000472585 ZNF461Q8TAF7 563 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 COL26A1Q96A83 441 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 ASB16Q96NS5 453 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 NAP1L4Q99733 375 aaKnown RBP10.26□□□□□ -0.77
VCL-204ENST00000472585 ARRDC1-AS1Q9H2J1 176 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 ZFP14Q9HCL3 533 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 ZNF334Q9HCZ1 680 aaPredicted RBP10.26□□□□□ -0.77
VCL-204ENST00000472585 PTPRHQ9HD43 1115 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 CEP72Q9P209 647 aa10.26□□□□□ -0.77
VCL-204ENST00000472585 SPEGQ15772 3267 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 TMEM8BA6NDV4 472 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 ARNTLO00327 626 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 ABLIM1O14639 778 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 TM4SF5O14894 197 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 JAK2O60674 1132 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 ZNF806P0C7X5 589 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 CHRNB1P11230 501 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 CYP11B2P19099 503 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 FOSBP53539 338 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 ST3GAL1Q11201 340 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 LRRC32Q14392 662 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 MAPK6Q16659 721 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 ME3Q16798 604 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 PSAPL1Q6NUJ1 521 aa10.25□□□□□ -0.77
VCL-204ENST00000472585 RTL10Q7L3V2 364 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms