RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 KMT5AQ9NQR1 393 aa10.01□□□□□ -0.81
SMC4-213ENST00000472282 PRMT7Q9NVM4 692 aaPredicted RBP10.01□□□□□ -0.81
SMC4-213ENST00000472282 USP25Q9UHP3 1055 aa10.01□□□□□ -0.81
SMC4-213ENST00000472282 PRG3Q9Y2Y8 225 aaPredicted RBP10.01□□□□□ -0.81
SMC4-213ENST00000472282 IRAK3Q9Y616 596 aa10.01□□□□□ -0.81
SMC4-213ENST00000472282 DOCK8Q8NF50 2099 aa10.01□□□□□ -0.81
SMC4-213ENST00000472282 CNTNAP2Q9UHC6 1331 aa10.01□□□□□ -0.81
SMC4-213ENST00000472282 INPPL1O15357 1258 aa10□□□□□ -0.81
SMC4-213ENST00000472282 TRAK2O60296 914 aa10□□□□□ -0.81
SMC4-213ENST00000472282 LILRB3O75022 631 aa10□□□□□ -0.81
SMC4-213ENST00000472282 PRPF40AO75400 957 aaKnown RBP10□□□□□ -0.81
SMC4-213ENST00000472282 EFEMP2O95967 443 aa10□□□□□ -0.81
SMC4-213ENST00000472282 AXLP30530 894 aa10□□□□□ -0.81
SMC4-213ENST00000472282 EFNA5P52803 228 aa10□□□□□ -0.81
SMC4-213ENST00000472282 SMTNP53814 917 aa10□□□□□ -0.81
SMC4-213ENST00000472282 NCKAP1LP55160 1127 aa10□□□□□ -0.81
SMC4-213ENST00000472282 FAM160A1Q05DH4 1040 aa10□□□□□ -0.81
SMC4-213ENST00000472282 DSC1Q08554 894 aa10□□□□□ -0.81
SMC4-213ENST00000472282 CUL4BQ13620 913 aa10□□□□□ -0.81
SMC4-213ENST00000472282 MAPK6Q16659 721 aa10□□□□□ -0.81
SMC4-213ENST00000472282 TUSC1Q2TAM9 212 aa10□□□□□ -0.81
SMC4-213ENST00000472282 RARS2Q5T160 578 aaKnown RBP10□□□□□ -0.81
SMC4-213ENST00000472282 TAS1R3Q7RTX0 852 aa10□□□□□ -0.81
SMC4-213ENST00000472282 CCDC65Q8IXS2 484 aa10□□□□□ -0.81
SMC4-213ENST00000472282 RNF168Q8IYW5 571 aaPredicted RBP10□□□□□ -0.81
SMC4-213ENST00000472282 FMR1NBQ8N0W7 255 aaPredicted RBP10□□□□□ -0.81
SMC4-213ENST00000472282 TMEM161BQ8NDZ6 487 aa10□□□□□ -0.81
SMC4-213ENST00000472282 ENGASEQ8NFI3 743 aa10□□□□□ -0.81
SMC4-213ENST00000472282 EDAQ92838 391 aa10□□□□□ -0.81
SMC4-213ENST00000472282 PAGE5Q96GU1 130 aa10□□□□□ -0.81
SMC4-213ENST00000472282 B3GALT6Q96L58 329 aa10□□□□□ -0.81
SMC4-213ENST00000472282 KLHL5Q96PQ7 755 aa10□□□□□ -0.81
SMC4-213ENST00000472282 FIZ1Q96SL8 496 aa10□□□□□ -0.81
SMC4-213ENST00000472282 C7orf25Q9BPX7 421 aa10□□□□□ -0.81
SMC4-213ENST00000472282 TMEM175Q9BSA9 504 aa10□□□□□ -0.81
SMC4-213ENST00000472282 PANK4Q9NVE7 773 aa10□□□□□ -0.81
SMC4-213ENST00000472282 KLK14Q9P0G3 267 aa10□□□□□ -0.81
SMC4-213ENST00000472282 ARHGAP28Q9P2N2 729 aa10□□□□□ -0.81
SMC4-213ENST00000472282 FAN1Q9Y2M0 1017 aa10□□□□□ -0.81
SMC4-213ENST00000472282 HCN4Q9Y3Q4 1203 aa10□□□□□ -0.81
SMC4-213ENST00000472282 A0A1B0GUA9 196 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 FSD2A1L4K1 749 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 FRMD3A2A2Y4 597 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 C2CD4DB7Z1M9 353 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 K7ERI5 159 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 C2CD2LO14523 706 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 ZIC2O95409 532 aaPredicted RBP9.99□□□□□ -0.81
SMC4-213ENST00000472282 ALDH2P05091 517 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 CNPP09543 421 aaKnown RBP9.99□□□□□ -0.81
SMC4-213ENST00000472282 SRGAP2BP0DMP2 458 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 MYBP10242 640 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 MAPTP10636 758 aaKnown RBP9.99□□□□□ -0.81
SMC4-213ENST00000472282 HOXB8P17481 243 aaPredicted RBP9.99□□□□□ -0.81
SMC4-213ENST00000472282 GAP43P17677 238 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 NMT1P30419 496 aaKnown RBP9.99□□□□□ -0.81
SMC4-213ENST00000472282 OR1G1P47890 313 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 UBE2HP62256 183 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 ZXDAP98168 799 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 SNW1Q13573 536 aaKnown RBP9.99□□□□□ -0.81
SMC4-213ENST00000472282 PCBP1Q15365 356 aaKnown RBP eCLIP9.99□□□□□ -0.813e-12■■■■□ 20.8
SMC4-213ENST00000472282 FAM187BQ17R55 369 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 TMEM132AQ24JP5 1023 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 EEF1DP3Q658K8 133 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 CNNM4Q6P4Q7 775 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 UNC13DQ70J99 1090 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 HAUS6Q7Z4H7 955 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 RSPH1Q8WYR4 309 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 FAM122AQ96E09 287 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 CCDC51Q96ER9 411 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 PRIMPOLQ96LW4 560 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 FAM193BQ96PV7 902 aaPredicted RBP9.99□□□□□ -0.81
SMC4-213ENST00000472282 PAAF1Q9BRP4 392 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 KLF16Q9BXK1 252 aaPredicted RBP9.99□□□□□ -0.81
SMC4-213ENST00000472282 FGFBP2Q9BYJ0 223 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 ADAM7Q9H2U9 754 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 SMOC2Q9H3U7 446 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 FZD8Q9H461 694 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 TBC1D7Q9P0N9 293 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 KANSL3Q9P2N6 904 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 SEL1LQ9UBV2 794 aa9.99□□□□□ -0.81
SMC4-213ENST00000472282 H0YCG3 227 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 ACKR2O00590 384 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 KINO60870 393 aaKnown RBP9.98□□□□□ -0.81
SMC4-213ENST00000472282 SOD2P04179 222 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 IGFBP6P24592 240 aaPredicted RBP9.98□□□□□ -0.81
SMC4-213ENST00000472282 CLCN4P51793 760 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 STRN3Q13033 797 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 PRPF4BQ13523 1007 aaKnown RBP9.98□□□□□ -0.81
SMC4-213ENST00000472282 POSTNQ15063 836 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 NT5DC1Q5TFE4 455 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 SLC27A1Q6PCB7 646 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 TMC5Q6UXY8 1006 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 HPS3Q969F9 1004 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 NTPCRQ9BSD7 190 aaKnown RBP9.98□□□□□ -0.81
SMC4-213ENST00000472282 HERC2P3Q9BVR0 1158 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 GPR62Q9BZJ7 368 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 TRIM6Q9C030 488 aaPredicted RBP9.98□□□□□ -0.81
SMC4-213ENST00000472282 PDZD7Q9H5P4 517 aa9.98□□□□□ -0.81
SMC4-213ENST00000472282 MRPL44Q9H9J2 332 aaKnown RBP9.98□□□□□ -0.81
SMC4-213ENST00000472282 OLFML3Q9NRN5 406 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms